Molecular phylogeny of the Drosophila obscura species group, with emphasis on the Old World species

Gao, Jian-jun; Watabe, Hide-aki; Aotsuka, Tadashi; Pang, Jun-feng; Zhang, Ya-ping

doi:10.1186/1471-2148-7-87

BMC Ecology and Evolution

Table 3 Accession numbers for sequences. Sequences with underlined accession numbers are used for the statistical test of temporal pattern only.

From: Molecular phylogeny of the Drosophila obscura species group, with emphasis on the Old World species

	ND2	COI	COII	Cyt b	Adh	28S
D. luguensis	EF216229	EF216247	EF216257	EF216273	EF216308	EF216295
D. sinobscura	EF216236	EF216249	EF216259	EF216280	U90954 [15]	EF216303
D. hubeiensis (HB)	EF216225	EF216243	EF216253	EF216269	U90953 [15]	EF216291
D. hubeiensis (KM)	EF216226	EF216244	EF216254	EF216270	EF216312	EF216292
D. dianensis	EF216222	EF216241	EF216251	EF216266	EF216310	EF216288
D. subsilvestris	EF216237	U51616 [11]	EF216260	EF216281	AF067283 [27]	EF216304
D. bifasciata	EF216221	U51611 [11]	M95147 [9]	EF216265	U40986 [20]	EF216287
D. imaii	EF216227	EF216245	EF216255	EF216271	U40987 [20]	EF216293
D. tsukubaensis	EF216239	EF216250	EF216261	EF216283	AF067284 [27]	EF216306
D. limingi	EF216228	EF216246	EF216256	EF216272	EF216309	EF216294
D. obscura	EF216233	U51614 [11]	AF081356 [13]	EF216277	U90955 [15]	EF216300
D. ambigua	EF216220	U51610 [11]	M95145 [9]	EF216264	X54813 [21]	EF216286
D. tristis	EF216240	U51617 [11]	EF216262	EF216284	U90956 [15]	EF216307
D. subobscura	EF216238	U51615 [11]	M95151 [9]	EF216282	M55545 [22]	EF216305
D. madeirensis	EF216230	U51613 [11]	AF081355 [13]	EF216274	X60112 [23]	EF216296
D. guanche	EF216223	U51612 [11]	AF081354 [13]	EF216267	X60113 [23]	EF216289
D. affinis	EF216219	U51604 [11]	M95140 [9]	EF216263	AF067280 [27]	EF216285
D. algonquin	-	-	M95144 [9]	U07279 [10]	-	-
D. athabasca	-	-	M95141 [9]	-	-	-
D. azteca	-	U51605 [11]	M95146 [9]	U07283 [10]	-	X71205 [17]
D. narragansett	-	-	M95149 [9]	-	-	-
D. tolteca	-	-	M95152 [9]	-	AF081357 [13]	-
D. helvetica	EF216224	EF216242	EF216252	EF216268	AF067282 [27]	EF216290
D. pseudoobscura	EF216235	U51602 [11]	M95150 [9]	EF216279	X68164 [24]	EF216302
D. persimilis	EF216234	U51609 [11]	M95143 [9]	EF216278	M60997 [25]	EF216301
D. miranda	EF216232	U51608 [11]	M95148 [9]	EF216276	M60998 [25]	EF216299
D. lowei	-	-	M95142 [9]	-	-	-
D. microlabis	EF216231	EF216248	EF216258	EF216275	EF216311	EF216298
D. melanogaster	NC_001709 [16]	U51619 [11]	J01404 [19]	NC001709 [16]	M17833 [26]	EF216297
D. yakuba	X03240 [17]	X03240 [18]	X03240 [18]	X03240 [18]	X54120*	X71167 [28]

* Ashburner, unpublished data.

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ISSN: 2730-7182

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