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Table 1 Maculinea species used in this study, lineages detected in CR1 clade, and GenBank accession numbers of isolated clones.

From: CR1 clade of non-LTR retrotransposons from Maculinea butterflies (Lepidoptera: Lycaenidae): evidence for recent horizontal transmission

genus

species

lineage

No. of clones with RT

Accession numbers

Maculinea

teleius

 

15

 
  

lineage A

7

[GenBank:DQ823008],

    

[GenBank:DQ823009],

    

[GenBank:DQ823010],

    

[GenBank:DQ823011],

    

[GenBank:DQ823016],

    

[GenBank:DQ823017],

    

[GenBank:DQ823018]

  

lineage B

6

[GenBank:DQ823029];

    

[GenBank:DQ823030];

    

[GenBank:DQ823035],

    

[GenBank:DQ823036],

    

[GenBank:DQ823037],

    

[GenBank:DQ823038]

  

lineage C

2

[GenBank:DQ836363];

    

[GenBank:DQ836364]

Maculinea

nausithous

 

13 (+1)*

 
  

lineage A

8

[GenBank:DQ823012],

    

[GenBank:DQ823013],

    

[GenBank:DQ823014],

    

[GenBank:DQ823019],

    

[GenBank:DQ823020],

    

[GenBank:DQ823021],

    

[GenBank:DQ823022],

    

[GenBank:DQ823023]

  

lineage B

3

[GenBank:DQ823031];

    

[GenBank:DQ823032];

    

[GenBank:DQ823039]

  

lineage C

2

[GenBank:DQ836365];

    

[GenBank:DQ836366]

Maculinea

alcon

 

10 (+1)*

 
  

lineage A

8

[GenBank:DQ823012];

    

[GenBank:DQ823024],

    

[GenBank:DQ823025],

    

[GenBank:DQ823026],

    

[GenBank:DQ823027],

    

[GenBank:DQ823028]

  

lineage B

2

[GenBank:DQ823033];

    

[GenBank:DQ823034]

Maculinea

arion

 

9

 
  

lineage A

6

[GenBank:DQ994657],

    

[GenBank:DQ994658],

    

[GenBank:DQ994659],

    

[GenBank:DQ994660],

    

[GenBank:DQ994661],

    

[GenBank:DQ994662]

  

lineage B

3

[GenBank:DQ994663],

    

[GenBank:DQ994664],

    

[GenBank:DQ994665]

  1. * single clones appeared to be R1 elements