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Table 2 HIV estimated parameters.

From: Identifying dramatic selection shifts in phylogenetic trees

Parameter

Posterior Mean

LBCI

UBCI

PSRF

θ

0.27

0.18

0.38

1.01

l

0.56

0.21

0.89

1.03

α

0.23

0.19

0.26

1.00

κ

5.32

4.89

5.77

1.01

t 3

0.01

0.00

0.01

1.02

log10 B DP ≈ inf (decisive support for)

 

log10 B BC = 4.08 (decisive support for)

 
  1. The posterior mean, upper and lower 95% Bayesian credible interval bounds (UBCI and LBCI) and potential scale reduction factor (PSRF) [54] for all continuous parameters of the model. Data for the branch length with largest PSRF is reported. The last two rows report the Bayes factor in support of a divergence point and the Bayes factor in support of a divergence point along the middle branch.