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Table 1 Distribution of transcriptionally active regions (TARs), categorized by their distances from the nearest gene annotations

From: Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human

 

Annotation on the opposite strand

 

Distal

10 kb

1 kb

exon

intron

Total

Annotation on the same strand as TAR4

1 Distal

3,695 (21.5%)

537 (3.1%)

149 (0.9%)

861 (5.0%)

1,414 (8.2%)

6,656 (38.7%)

 

210 kb

799 (4.6%)

224 (1.3%)

59 (0.3%)

265 (1.5%)

146 (0.8%)

1,493 (8.7%)

 

31 kb

347 (2.0%)

92 (0.5%)

32 (0.2%)

52 (0.3%)

20 (0.1%)

543 (3.2%)

 

exon

4,637 (27.0%)

1,454 (8.4%)

345 (2.0%)

120 (0.7%)

172 (1.0%)

6,728 (39.1%)

 

intron

1,554 (9.0%)

137 (0.8%)

24 (0.1%)

35 (0.2%)

28 (0.2%)

1,778 (10.3%)

 

Total:

11,032 (64.1%)

2,444 (14.2%)

609 (3.5%)

1,333 (7.8%)

1,780 (10.4%)

17,198

  1. 1Distal: distance from nearest annotated exon > 10 kb
  2. 210 kb: distance from nearest annotated exon is less than 10 kb but longer than 1 kb
  3. 31 kb: distance from nearest annotated exon is less than 1 kb but do not overlap with exons
  4. 4 Genome annotation was based on NCBI assembly 34 downloaded from Ensembl.