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Table 3 Total length and density of TARs in different types of genomic regions1

From: Comparative analysis of genome tiling array data reveals many novel primate-specific functional RNAs in human

 

Annotation on the antisense strand

 

Distal

10 kb

1 kb

exon

intron

Total

Annotation on the sense strand2

Distal

950,963 (574)

137,168 (1,048)

38,856 (2,202)

223,699 (6,012)

364,308 (831)

1,715,000 (753)

 

10 kb

212,945 (1,596)

61,991 (2,334)

15,186 (3,584)

69,413 (9,683)

37,434 (1,077)

396,969 (1,930)

 

1 kb

97,974 (5,454)

24,062 (5631)

8,793 (8,647)

14,475 (13,391)

4,960 (1,751)

150,264 (5,570)

 

exon

1,370,991 (30,952)

422,364 (55,666)

103,263 (90,951)

33,079 (29,331)

53,984 (1,4043)

1,983,681 (34,200)

 

intron

398,063 (884)

34,368 (970)

6,230 (2,104)

8,752 (2,107)

7,059 (586)

454,472 (900)

 

Total:

3,030,936 (1,320)

679,953 (3,330)

172,328 (6,380)

349,418 (6,890)

467,745 (953)

 
  1. 1Numbers in the brackets are the normalized densities of the TARs, i.e. number of transcribed nucleotides per megabase of genomic DNA
  2. 2Annotation is the same as in Table 1(A)