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Table 5 Taxonomic sampling and accession numbers of the four nuclear genes.

From: Molecular phylogeny and divergence times of Malagasy tenrecs: Influence of data partitioning and taxon sampling on dating analyses

  Species ADRA2B AR GHR vWF
EUTHERIA      
RODENTIA      
   Muridae Mus musculus L00979 NM_013476 M33324 AJ238390
   Caviidae Cavia porcellus AJ271336 AJ893531 AF238492 AJ224663
   Sciuridae Marmota/Sciurus 1 AJ315942 AM905334* AF332032 J224671
LAGOMORPHA      
   Leporidae Oryctolagus cuniculus Y15946 AJ893533 AF015252 U31618
  Lepus sp. 2 AJ427254 AJ893534 AF332016 AJ224669
   Ochotonidae Ochotona princeps AJ427253 AJ893535 AF332015 AJ224672
PRIMATES      
   Lemuridae Eulemur sp.3 AJ891059 AJ893537 AF540627 AJ891087
   Hominidae Homo sapiens M34041 M27423 X06562 X06828
SCANDENTIA Tupaia sp. 4 AJ251187 AM905335* AF540643 U31624
DERMOPTERA Cynocephalus variegatus AJ251182 AM905340* AF540625 U31606
CARNIVORA      
   Canidae Canis familiaris AJ891051 AF197950 AF133835 L16903
   Felidae Cryptoprocta ferox AJ891056 AJ893549 AY928733 AJ891085
PERISSODACTYLA      
   Rhinocerotidae Ceratotherium/Diceros 5 AJ251184 AJ893553 AM905343* U31604
   Equidae Equus sp. 6 Y15945 AJ893554 AF392878 U31610
CETARTIODACTYLA      
   Camelidae Lama sp. 7 AJ315941 AJ893555 AM905349* AF108835
   Suidae Sus scrofa AJ251177 AF161717 X54429 S78431
   Physeteridae Physeter catodon AJ427417 AJ893556 AM905344* AF108834
CHIROPTERA Cynopterus/Pteropus 8 AJ251181 AM905339* AF392893 U31605
EULIPOTYPHLA Erinaceus/Crocidura 9 Y12521 AJ893557 AF392882 AY057834
XENARTHRA Myrmecophaga/Cyclopes 10 MTR427373 AJ893558 AF392875 MTR278157
SIRENIA Trichechus/Dugong 11 AJ251109 AJ893559 AF392891 U31608
PROBOSCIDEA Elephas maximus Y12525 AJ893560 AF332013 U31611
HYRACOIDEA Procavia capensis Y12523 AJ893561 AF392896 U31619
TUBULIDENTATA Orycteropus afer Y12522 AJ893563 AF392892 U31617
MACROSCELIDEA Macroscelides proboscideus Y12524 AM905337* AF332014 AY310893
AFROSORICIDA      
   Chrysochloridae Amblysomus/Chrysospalax 12 Y12526 AJ893562 AF392877 U97534
   Tenrecidae      
Tenrecinae Setifer setosus AJ891077 AJ893566 DQ202292 AJ891098
  Echinops telfairi Y17692 AJ893565 AF392889 AF076478
  Tenrec ecaudatus AJ251108 AJ893564 AF392890 AF390536
  Hemicentetes semispinosus AJ891065 AJ893567 DQ202288 AJ891093
   Oryzoryctinae Oryzorictes hova AJ891074 AJ893568 AF392886 AJ891097
  Microgale talazaci - - AF392885 -
  Microgale brevicaudata AJ891072 AJ893569 AM905345* AM905350*
  Microgale cf. parvula AM905341* AM905336* AM905346* AM905351*
  Limnogale mergulus AJ891069 AJ893570 DQ202289 AJ891096
   Geogalinae Geogale aurita AM905342* AM905338* AM905347* AM905352*
   Potamogalinae Micropotamogale lamottei AJ251107 AJ893571 DQ202290 AF390538
MARSUPIALIA      
DIDELPHIMORPHIA Didelphis/Monodelphis 13 Y15943 AJ893572 AF238491 AF226848
DIPROTODONTIA Macropus sp. 14 AJ251183 AJ893573 AM905348* AJ224670
  1. 1 Sciurus vulgaris (ADRA2B, AR) combined with S. niger (GHR) and Marmota monax (vWF)
  2. 2 Lepus crawshayi (ADRA2B, AR, vWF) combined with L. capensis (GHR)
  3. 3 Eulemur fulvus fulvus (ADRA2B, AR, vWF) combined with E. coronatus (GHR)
  4. 4 Tupaia tana (ADRA2B, AR, GHR) combined with T. glis (VWF)
  5. 5 Diceros bicornis (ADRA2B, AR, GHR) combined with Ceratotherium simum (vWF);
  6. 6 Equus caballus (ADRA2B, AR, GHR) combined with E. asinus (vWF)
  7. 7 Lama pacos (ADRA2B, AR, GHR) combined with L. glama (vWF)
  8. 8Cynopterus sphinx (ADRA2B, AR, vWF) combined with Pteropus vampyrus (GHR)
  9. 9 Erinaceus europaeus (ADRA2B, AR, GHR) combined with Crocidura russula (vWF)
  10. 10 Myrmecophaga tridactyla (ADRA2B, vWF, GHR) combined with Cyclopes didactylus (AR)
  11. 11 Trichechus manatus (ADRA2B, AR, GHR) combined with Dugong dugon (vWF)
  12. 12 Amblysomus hottentotus (ADRA2B, AR, vWF) combined with Chrysospalax trevelyani (GHR)
  13. 13 Didelphis marsupialis (ADRA2B, AR) combined with D. virginiana (vWF) and Monodelphis domestica (GHR)
  14. 14 Macropus rufus (ADRA2B, AR, GHR) combined with M. giganteus (vWF)
  15. Upperscore numbers (1–14) refer to taxa for which sequences from different species were combined in the concatenated analysis. * New sequences from the present study. The full alignment is available from Treebase (accession number M3679).