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Table 1 Maximum-likelihood codon substitution analyses of beta-defensin genes in catarrhine primates

From: Directional and balancing selection in human beta-defensins

Location

Gene

Number of aligned codons

Likelihood Model M1a 0<ω0<1, ω1 = 1

Likelihood Model M2a 0<ω0<1, ω1 = 1, ω2>1

Positive selection P value

Selected sites (probability)

8p23.1

DEFB1

67

-397.25

-390.07

0.00076*

R61 (0.997)

 

DEFB4

63

-401.51

-400.69

0.44

 
 

DEFB103

66

-334.85

-334.85

1.0

 
 

DEFB104

71

-407.87

-406.55

0.27

 
 

DEFB105

77

-509.99

-509.99

1.0

 
 

DEFB106

64

-353.50

-353.09

0.66

 
 

DEFB107

65

-343.19

-343.19

1.0

 

20q11

DEFB118

122

-734.34

-728.92

0.0044*

R110 (0.967)

 

DEFB119

83

-501.92

-501.23

0.50

 
 

DEFB120

86

-485.55

-478.39

0.00077*

M81 (0.998)

 

DEFB123

66

-289.31

-289.25

0.95

 

20p13

DEFB125

125

-779.12

-779.10

0.98

 
 

DEFB126

85

-591.65

-591.47

0.83

 
 

DEFB127

87

-498.13

-493.43

0.0091*

S71 (0.984)

 

DEFB128

91

-526.11

-526.09

0.98

 
 

DEFB129

181

-946.41

-946.41

1.0

 
 

DEFB132

93

-594.10

-590.54

0.029*

I57 (0.950)