Table 2 ML Simulation Results. Simulation results with maximum likelihood tree reconstruction. Each gene tree was reconstructed with phyML with 200 sites with a GTR nucleotide substitution model. In all cases there were 20 taxa per tree and 1000 replicates.
| Â | Â | Number of Genes | ||||||
|---|---|---|---|---|---|---|---|---|
θ | Method | 10 | 50 | 100 | 200 | 500 | 1000 | 2000 |
0.05 | TCM | 8 | 36 | 53 | 66 | 75 | 80 | 86 |
0.05 | MRe | 9 | 35 | 48 | 64 | 74 | 81 | 83 |
0.1 | TCM | 6 | 15 | 36 | 47 | 63 | 74 | 81 |
0.1 | MRe | 6 | 14 | 31 | 38 | 51 | 65 | 69 |