TY - CHAP AU - Avise, J. C. PY - 2000 DA - 2000// BT - Phylogeography: The History and Formation of Species PB - Harvard University Press CY - USA ID - Avise2000 ER - TY - JOUR AU - Palumbi, S. R. PY - 1994 DA - 1994// TI - Genetic divergence, reproductive isolation, and marine speciation JO - Annu Rev Ecol Syst VL - 25 ID - Palumbi1994 ER - TY - JOUR AU - Hewitt, G. PY - 2000 DA - 2000// TI - The genetic legacy of the Quaternary ice ages JO - Nature VL - 405 ID - Hewitt2000 ER - TY - JOUR AU - Kamal, M. I. AU - Richard, A. N. AU - Hewitt, G. M. PY - 1996 DA - 1996// TI - Spatial patterns of genetic variation generated by different forms of dispersal during range expansion JO - Heredity VL - 77 ID - Kamal1996 ER - TY - JOUR AU - Ward, R. AU - Woodwark, M. AU - Skibinski, O. PY - 1994 DA - 1994// TI - A comparison of genetic diversity levels in marine, freshwater and anadromous fishes JO - Journal of Fish Biology VL - 44 ID - Ward1994 ER - TY - JOUR AU - Gyllensten, U. PY - 1985 DA - 1985// TI - The genetic structure of fish: differences in the intraspecific distribution of biochemical genetic variation between marine, anadromous, and freshwater species JO - Journal of Fish Biology VL - 26 ID - Gyllensten1985 ER - TY - JOUR AU - Hansen, M. M. AU - Mensberg, K. -. L. D. PY - 1998 DA - 1998// TI - Genetic differentiation and relationship between genetic and geographical distance in Danish sea trout (Salmo trutta L.) populations JO - Heredity VL - 81 ID - Hansen1998 ER - TY - JOUR AU - Perdices, A. AU - Sayanda, D. AU - Coelho, M. M. PY - 2005 DA - 2005// TI - Mitochondrial diversity of Opsariichthys bidens(Teleostei, Cyprinidae) in three Chinese drainages JO - Mol Phylogenet Evol VL - 37 ID - Perdices2005 ER - TY - JOUR AU - Xia, Y. Z. AU - Chen, Y. Y. AU - Sheng, Y. PY - 2006 DA - 2006// TI - Phylogeographic Structure of Lenok (Brachymystax lenokPallas) (Salmoninae, Salmonidae) Populations in Water Systems of Eastern China, Inferred from Mitochondrial DNA Sequences JO - Zoological Studies VL - 45 ID - Xia2006 ER - TY - JOUR AU - McGlashan, D. J. AU - Hughes, J. M. PY - 2000 DA - 2000// TI - Reconciling patterns of genetic variation with stream structure, earth history and biology in the Australian freshwater fish Craterocephalus stercusmuscarum(Atherinidae) JO - Molecular Ecology VL - 9 ID - McGlashan2000 ER - TY - JOUR AU - Currens, K. AU - Schreck, C. AU - Li, W. H. PY - 1990 DA - 1990// TI - Allozyme and morphological divergence of rainbow trout (Oncorhynchus mykiss) above and below waterfalls in the Deschutes River, Oregon JO - Copeia VL - 1990 ID - Currens1990 ER - TY - JOUR AU - Lambeck, K. AU - Esat, T. M. AU - Potter, E. K. PY - 2002 DA - 2002// TI - Links between climate and sea levels for the past three million years JO - Nature VL - 419 ID - Lambeck2002 ER - TY - JOUR AU - Durand, J. D. AU - Persat, H. AU - Bouvet, Y. PY - 1999 DA - 1999// TI - Phylogeography and postglacial dispersion of the chub (Leuciscus cephalus) in Europe JO - Molecular Ecology VL - 8 ID - Durand1999 ER - TY - JOUR AU - Tsigenopoulos, C. S. AU - Berrebi, P. PY - 2000 DA - 2000// TI - Molecular Phylogeny of North Mediterranean Freshwater Barbs (Genus Barbus: Cyprinidae) Inferred from Cytochrome bSequences: Biogeographic and Systematic Implications JO - Molecular Phylogenetics and Evolution VL - 14 ID - Tsigenopoulos2000 ER - TY - JOUR AU - Avise, J. C. AU - Arnold, J. AU - Ball, R. M. AU - Bermingham, E. AU - Lamb, T. PY - 1987 DA - 1987// TI - Intraspecific Phylogeography: The Mitochondrial DNA Bridge Between Population Genetics and Systematics JO - Annual Review of Ecology and Systematics VL - 18 ID - Avise1987 ER - TY - JOUR AU - Cortey, M. AU - Pla, C. AU - Garcia-Marin, J. L. PY - 2004 DA - 2004// TI - Historical biogeography of Mediterranean trout JO - Molecular Phylogenetics and Evolution VL - 33 ID - Cortey2004 ER - TY - JOUR AU - Fu, C. AU - Luo, J. AU - Wu, J. AU - Andres Lopez, J. AU - Zhong, Y. AU - Lei, G. AU - Chen, J. PY - 2005 DA - 2005// TI - Phylogenetic relationships of salangid fishes (Osmeridae, Salanginae) with comments on phylogenetic placement of the salangids based on mitochondrial DNA sequences JO - Molecular Phylogenetics and Evolution VL - 35 ID - Fu2005 ER - TY - JOUR AU - Waters, J. AU - Saruwatari, T. AU - Kobayashi, T. AU - Oohara, I. AU - McDowall, R. AU - Wallis, G. P. PY - 2002 DA - 2002// TI - Phylogenetic placement of Retropinnid Fishes: data set incongruence can be reduced by using asymmetric character state transformation costs JO - Systematic Biology VL - 51 ID - Waters2002 ER - TY - JOUR AU - Zhang, Y. L. AU - Qiao, X. G. PY - 1994 DA - 1994// TI - Study on phylogeny and zoogeography of fishes of the family Salangidae JO - Acta Zoologica Taiwanica VL - 5 ID - Zhang1994 ER - TY - CHAP AU - Nelson, J. PY - 1994 DA - 1994// BT - Fishes of the World PB - Sons, Inc. CY - New York ID - Nelson1994 ER - TY - CHAP AU - Cheng, Q. T. AU - Zheng, B. S. PY - 1987 DA - 1987// BT - Systematic Synopsis of Chinese Fishes PB - Science Press CY - Beijing ID - Cheng1987 ER - TY - JOUR AU - Roberts, T. PY - 1984 DA - 1984// TI - Skeletal anatomy and classification of the neotenic Asian salmoniform superfamily Salangoidea (icefishes or noodlefishes) JO - Proceedings of the California Academy of Science VL - 43 ID - Roberts1984 ER - TY - CHAP AU - Bernatchez, L. AU - Wilson, C. C. PY - 1998 DA - 1998// TI - Comparative phylogeography of Nearctic and Palearctic fishes BT - Molecular Ecology ID - Bernatchez1998 ER - TY - JOUR AU - Wang, Z. S. AU - Lu, C. AU - Hu, H. J. AU - Zhou, Y. AU - Xu, C. R. AU - Lei, G. C. PY - 2005 DA - 2005// TI - Freshwater icefishes (Salangidae) in the Yangtze River basin of China: Spatial distribution patterns and environmental determinants JO - Environmental Biology of Fishes VL - 73 ID - Wang2005 ER - TY - CHAP AU - Li, S. F. PY - 2001 DA - 2001// BT - A study on biodiversity and its conservation of major fishes in the Yangtze River PB - Shanghai Scientific and Technical Publishers CY - Shanghai ID - Li2001 ER - TY - JOUR AU - Knutsen, H. AU - Jorde, P. E. AU - Andre, C. AU - Stenseth, N. C. PY - 2003 DA - 2003// TI - Fine-scaled geographical population structuring in a highly mobile marine species: the Atlantic cod JO - Molecular Ecology VL - 12 ID - Knutsen2003 ER - TY - JOUR AU - Regan, C. PY - 1908 DA - 1908// TI - Description of new fishes from Lake Candidius, Formosa, collected by Dr. A. Moltrecht JO - Annals and Magazine of Natural History Series VL - 8 ID - Regan1908 ER - TY - JOUR AU - Wakiya, Y. AU - Takahasi, N. PY - 1937 DA - 1937// TI - Study on fishes of the family Salangidae JO - Journal of the College of Agriculture, Imperial University of Tokyo VL - 14 ID - Wakiya1937 ER - TY - JOUR AU - Dou, S. Z. AU - Chen, D. G. PY - 1994 DA - 1994// TI - Taxonomy, biology and abundance of Icefishes Salangidae in the Yellow River estuary of the Bohai Sea, China JO - Journal of Fish Biology VL - 45 ID - Dou1994 ER - TY - JOUR AU - Zhang, J. AU - Li, M. AU - Xu, M. Q. AU - Takita, T. AU - Wei, F. W. PY - 2007 DA - 2007// TI - Molecular phylogeny of icefish Salangidae based on complete mtDNA cytochrome b sequences, with comments on estuarine fish evolution JO - Biological Journal of the Linnean Society VL - 91 ID - Zhang2007 ER - TY - CHAP AU - Kutzbach, J. AU - Ruddiman, W. AU - Prell, W. ED - WF, R. PY - 1997 DA - 1997// TI - Tectonic Uplift and Climate Change BT - New York ID - Kutzbach1997 ER - TY - CHAP AU - Luo, L. X. AU - Xing, J. M. AU - Wang, N. Q. AU - Shen, Y. C. AU - Ren, M. E. AU - Zeng, Z. X. AU - Zhu, S. D. PY - 1981 DA - 1981// BT - The Physical Geography of China PB - Science Press CY - Beijing ID - Luo1981 ER - TY - CHAP AU - Huang, x. Q. AU - Su, F. C. AU - Mei, H. A. PY - 1995 DA - 1995// BT - Rivers in China PB - Commercial Press CY - Beijing ID - Huang1995 ER - TY - JOUR AU - Myers, G. S. PY - 1949 DA - 1949// TI - Salt-tolerance of fresh-water fish groups in relation to zoogeographical problems JO - Bijdr Dierk VL - 28 ID - Myers1949 ER - TY - JOUR AU - Cantatore, P. AU - Roberti, M. AU - Pesole, G. AU - Ludovico, A. AU - Milella, F. AU - Gadaleta, M. N. AU - Saccone, C. PY - 1994 DA - 1994// TI - Evolutionary analysis of cytochrome b sequences in some Perciformes: evidence for a slower rate of evolution than in mammals JO - J Mol Evol VL - 39 ID - Cantatore1994 ER - TY - JOUR AU - Zhang, D. AU - Hewitt, G. PY - 1996 DA - 1996// TI - Nuclear integrations challenges for mitochondrial DNA markers JO - Trends of Ecology and Evolution VL - 11 ID - Zhang1996 ER - TY - JOUR AU - Castelloe, J. AU - Templeton, A. R. PY - 1994 DA - 1994// TI - Root Probabilities for Intraspecific Gene Trees under Neutral Coalescent Theory JO - Molecular Phylogenetics and Evolution VL - 3 ID - Castelloe1994 ER - TY - JOUR AU - Strimmer, K. AU - Pybus, O. G. PY - 2001 DA - 2001// TI - Exploring the Demographic History of DNA Sequences Using the Generalized Skyline Plot JO - Mol Biol Evol VL - 18 ID - Strimmer2001 ER - TY - JOUR AU - Pybus, O. G. AU - Rambaut, A. AU - Harvey, P. H. PY - 2000 DA - 2000// TI - An Integrated Framework for the Inference of Viral Population History From Reconstructed Genealogies JO - Genetics VL - 155 ID - Pybus2000 ER - TY - JOUR AU - Fu, Y. X. PY - 1997 DA - 1997// TI - Statistical Tests of Neutrality of Mutations Against Population Growth, Hitchhiking and Background Selection JO - Genetics VL - 147 ID - Fu1997 ER - TY - JOUR AU - Ramos-Onsins, S. E. AU - Rozas, J. PY - 2002 DA - 2002// TI - Statistical Properties of New Neutrality Tests Against Population Growth JO - Mol Biol Evol VL - 19 ID - Ramos-Onsins2002 ER - TY - JOUR AU - Fu, Y. X. AU - Li, W. H. PY - 1993 DA - 1993// TI - Statistical Tests of Neutrality of Mutations JO - Genetics VL - 133 ID - Fu1993 ER - TY - JOUR AU - Kuhner, M. K. AU - Yamato, J. AU - Felsenstein, J. PY - 1998 DA - 1998// TI - Maximum Likelihood Estimation of Population Growth Rates Based on the Coalescent JO - Genetics VL - 149 ID - Kuhner1998 ER - TY - JOUR AU - Bahlo, M. AU - Griffiths, R. C. PY - 2000 DA - 2000// TI - Inference from Gene Trees in a Subdivided Population JO - Theoretical Population Biology VL - 57 ID - Bahlo2000 ER - TY - JOUR AU - Cook, R. M. AU - Sinclair, A. AU - Stefansson, G. PY - 1997 DA - 1997// TI - Potential collapse of North Sea cod stocks JO - Nature VL - 385 ID - Cook1997 ER - TY - JOUR AU - Grant, W. A. S. AU - Bowen, B. W. PY - 1998 DA - 1998// TI - Shallow population histories in deep evolutionary lineages of marine fishes: insights from sardines and anchovies and lessons for conservation JO - J Hered VL - 89 ID - Grant1998 ER - TY - JOUR AU - Frankham, R. PY - 1996 DA - 1996// TI - Relationship of genetic variation to population size in wildlife JO - Conservation Biology VL - 10 ID - Frankham1996 ER - TY - JOUR AU - Meffe, G. AU - Vrijenhoek, R. PY - 1988 DA - 1988// TI - Conservation genetics in the management of desert fishes JO - Conservation Biology VL - 2 ID - Meffe1988 ER - TY - JOUR AU - Hashiguchi, Y. AU - Kado, T. AU - Kimura, S. AU - Tachida, H. PY - 2006 DA - 2006// TI - Comparative phylogeography of two bitterlings, Tanakia lanceolata and T. limbata(Teleostei, Cyprinidae), in Kyushu and adjacent districts of western Japan, based on mitochondrial DNA analysis JO - Zoolog Sci VL - 23 ID - Hashiguchi2006 ER - TY - JOUR AU - Hynes, R. AU - Ferguson, A. AU - McCann, M. PY - 1996 DA - 1996// TI - Variation in mitochondrial DNA and post-glacial colonisation of north-west Europe by. brown trout (Salmo trutta L.) JO - Journal of Fish Biology VL - 48 ID - Hynes1996 ER - TY - JOUR AU - Templeton, A. R. PY - 2004 DA - 2004// TI - Statistical phylogeography: methods of evaluating and minimizing inference errors JO - Molecular Ecology VL - 13 ID - Templeton2004 ER - TY - JOUR AU - Slatkin, M. AU - Hudson, R. R. PY - 1991 DA - 1991// TI - Pairwise Comparisons of Mitochondrial DNA Sequences in Stable and Exponentially Growing Populations JO - Genetics VL - 129 ID - Slatkin1991 ER - TY - JOUR AU - Rogers, A. R. AU - Harpending, H. PY - 1992 DA - 1992// TI - Population growth makes waves in the distribution of pairwise genetic differences JO - Mol Biol Evol VL - 9 ID - Rogers1992 ER - TY - JOUR AU - Polanski, A. AU - Kimmel, M. AU - Chakraborty, R. PY - 1998 DA - 1998// TI - Application of a time-dependent coalescence process for inferring the history of population size changes from DNA sequence data JO - Proceedings of the National Academy of Sciences VL - 95 ID - Polanski1998 ER - TY - JOUR AU - Drummond, A. J. AU - Rambaut, A. AU - Shapiro, B. AU - Pybus, O. G. PY - 2005 DA - 2005// TI - Bayesian Coalescent Inference of Past Population Dynamics from Molecular Sequences JO - Mol Biol Evol VL - 22 ID - Drummond2005 ER - TY - JOUR AU - Schneider, S. AU - Excoffier, L. PY - 1999 DA - 1999// TI - Estimation of Past Demographic Parameters From the Distribution of Pairwise Differences When the Mutation Rates Vary Among Sites: Application to Human Mitochondrial DNA JO - Genetics VL - 152 ID - Schneider1999 ER - TY - JOUR AU - Emerson, B. C. AU - Paradis, E. AU - Thebaud, C. PY - 2001 DA - 2001// TI - Revealing the demographic histories of species using DNA sequences JO - Trends in Ecology & Evolution VL - 16 ID - Emerson2001 ER - TY - JOUR AU - Beheregaray, L. B. AU - Ciofi, C. AU - Geist, D. AU - Gibbs, J. P. AU - Caccone, A. AU - Powell, J. R. PY - 2003 DA - 2003// TI - Genes Record a Prehistoric Volcano Eruption in the Galapagos JO - Science VL - 302 ID - Beheregaray2003 ER - TY - JOUR AU - Liu, J. X. AU - Gao, T. X. AU - Yokogawa, K. AU - Zhang, Y. P. PY - 2006 DA - 2006// TI - Differential population structuring and demographic history of two closely related fish species, Japanese sea bass (Lateolabrax japonicus) and spotted sea bass (Lateolabrax maculatus) in Northwestern Pacific JO - Molecular Phylogenetics and Evolution VL - 39 ID - Liu2006 ER - TY - CHAP AU - Wang, S. M. AU - Dou, H. S. PY - 1998 DA - 1998// BT - Lakes in China PB - Science Press CY - Beijing ID - Wang1998 ER - TY - CHAP AU - Xia, Z. K. PY - 1997 DA - 1997// BT - The Pleistocene Envioment PB - Beijing University Press CY - Beijing ID - Xia1997 ER - TY - JOUR AU - Chen, G. H. AU - Zhang, B. PY - 1991 DA - 1991// TI - study on the growth of salangid fishes in Poyang lake JO - JiangXi science VL - 9 ID - Chen1991 ER - TY - JOUR AU - Wang, Z. S. AU - Fu, C. Z. AU - Lui, G. C. PY - 2002 DA - 2002// TI - Biodiversity of Chinese icefishes (Salangidae) and their consering strategies JO - Biodiversity Science VL - 10 ID - Wang2002 ER - TY - JOUR AU - Wang, Z. S. AU - Lu, C. AU - Hu, H. J. AU - Xu, C. R. AU - Lei, G. C. PY - 2004 DA - 2004// TI - Dynamics of icefish (Salangidae) stocks in Nanyi Lake, eastern China: Degradation and overfishing JO - J Freshwater Ecol VL - 19 ID - Wang2004 ER - TY - JOUR AU - You, Y. AU - You, Q. PY - 1999 DA - 1999// TI - A study on bioecological and economic effect of Neosalanx TaihuensisChen in Taihu lake JO - Journal of Southwest Nationalities College VL - 25 ID - You1999 ER - TY - CHAP AU - Zeng, X. C. PY - 1990 DA - 1990// BT - Fishery resources in the Yangtze River basin PB - Marine Press CY - Beijing ID - Zeng1990 ER - TY - JOUR AU - Xie, P. AU - Chen, Y. PY - 1999 DA - 1999// TI - Threats to biodiversity in Chinese inland waters JO - Ambio VL - 28 ID - Xie1999 ER - TY - JOUR AU - Whiteley, A. R. AU - Spruell, P. AU - Allendorf, F. W. PY - 2006 DA - 2006// TI - Can common species provide valuable information for conservation? JO - Molecular Ecology VL - 15 ID - Whiteley2006 ER - TY - JOUR AU - Moritz, C. PY - 1994 DA - 1994// TI - Applications of mitochondrial DNA analysis in conservation: a critical review JO - Molecular Ecology VL - 3 ID - Moritz1994 ER - TY - JOUR AU - Sheldon, J. M. AU - Robert, H. D. AU - Michael, J. S. PY - 1996 DA - 1996// TI - Phylogeny of Pacific salmon and trout based on growth hormone type-2 and mitochondrial NADH dehydrogenase subunit 3 DNA sequences JO - Can J Fish Aquat Sci VL - 53 ID - Sheldon1996 ER - TY - JOUR AU - Asahida, T. AU - Kobayashi, T. AU - Saito, K. AU - Nakayama, I. PY - 1996 DA - 1996// TI - Tissue. preservation and total DNA extraction from fish stored at ambient temperature using buffers containing high concentration of urea JO - Fisheries Science VL - 62 ID - Asahida1996 ER - TY - JOUR AU - Thompson, J. D. AU - Gibson, T. J. AU - Plewniak, F. AU - Jeanmougin, F. AU - Higgins, D. G. PY - 1997 DA - 1997// TI - The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools JO - Nucl Acids Res VL - 25 ID - Thompson1997 ER - TY - JOUR AU - Rozas, J. AU - Sanchez-DelBarrio, J. C. AU - Messeguer, X. AU - Rozas, R. PY - 2003 DA - 2003// TI - DnaSP, DNA polymorphism analyses by the coalescent and other methods JO - Bioinformatics VL - 19 ID - Rozas2003 ER - TY - JOUR AU - Rozas, J. AU - Gullaud, M. AU - Blandin, G. AU - Aguade, M. PY - 2001 DA - 2001// TI - DNA Variation at the rp49 Gene Region of Drosophila simulans: Evolutionary Inferences From an Unusual Haplotype Structure JO - Genetics VL - 158 ID - Rozas2001 ER - TY - JOUR AU - Tamura, K. AU - Dudley, J. AU - Nei, M. AU - Kumar, S. PY - 2007 DA - 2007// TI - MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0 JO - Mol Biol Evol VL - 24 ID - Tamura2007 ER - TY - JOUR AU - Nei, M. AU - Gojobori, T. PY - 1986 DA - 1986// TI - Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions JO - Mol Biol Evol VL - 3 ID - Nei1986 ER - TY - JOUR AU - Zhang, J. AU - Rosenberg, H. F. AU - Nei, M. PY - 1998 DA - 1998// TI - Positive Darwinian selection after gene duplication in primate ribonuclease genes JO - PNAS VL - 95 ID - Zhang1998 ER - TY - CHAP AU - Nei, M. PY - 1987 DA - 1987// BT - Molecular Evolutionary Genetics PB - Columbia University Press CY - New York ID - Nei1987 ER - TY - JOUR AU - Excoffier, L. AU - Laval, L. G. AU - Schneider, S. PY - 2005 DA - 2005// TI - Arlequin ver. 3.0: An integrated software package for population genetics data analysis JO - Evolutionary Bioinformatics Online VL - 1 ID - Excoffier2005 ER - TY - JOUR AU - Weir, B. AU - Cockerham, C. PY - 1984 DA - 1984// TI - Estimating F-statistic for the analysis of population structure JO - Evolution VL - 38 ID - Weir1984 ER - TY - JOUR AU - Excoffier, L. AU - Smouse, P. E. AU - Quattro, J. M. PY - 1992 DA - 1992// TI - Analysis of Molecular Variance Inferred From Metric Distances Among DNA Haplotypes: Application to Human Mitochondrial DNA Restriction Data JO - Genetics VL - 131 ID - Excoffier1992 ER - TY - JOUR AU - Rice, W. R. PY - 1989 DA - 1989// TI - Analyzing tables of statistical tests JO - Evolution VL - 43 ID - Rice1989 ER - TY - JOUR AU - Mantel, N. PY - 1967 DA - 1967// TI - The Detection of Disease Clustering and a Generalized Regression Approach JO - Cancer Res VL - 27 ID - Mantel1967 ER - TY - CHAP AU - Swofford, D. PY - 2002 DA - 2002// BT - paup*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0b10 PB - Sinauer As sociates, Sunderland CY - Massachusetts ID - Swofford2002 ER - TY - JOUR AU - Posada, D. AU - Crandall, K. A. PY - 1998 DA - 1998// TI - MODELTEST: testing the model of DNA substitution JO - Bioinformatics VL - 14 ID - Posada1998 ER - TY - JOUR AU - Posada, D. AU - Crandall, K. A. PY - 2001 DA - 2001// TI - Intraspecific gene genealogies: trees grafting into networks JO - Trends in Ecology & Evolution VL - 16 ID - Posada2001 ER - TY - JOUR AU - Templeton, A. R. AU - Crandall, K. A. AU - Sing, C. F. PY - 1992 DA - 1992// TI - A Cladistic Analysis of Phenotypic Associations With Haplotypes Inferred From Restriction Endonuclease Mapping and DNA Sequence Data. III. Cladogram Estimation JO - Genetics VL - 132 ID - Templeton1992 ER - TY - JOUR AU - Clement, M. AU - Posada, D. AU - Crandall, K. A. PY - 2000 DA - 2000// TI - TCS: a computer program to estimate gene genealogies JO - Molecular Ecology VL - 9 ID - Clement2000 ER - TY - JOUR AU - Templeton, A. R. AU - Sing, C. F. PY - 1993 DA - 1993// TI - A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping. IV. Nested analyses with cladogram uncertainty and recombination JO - Genetics VL - 134 ID - Templeton1993 ER - TY - JOUR AU - Crandall, K. A. AU - Templeton, A. R. PY - 1993 DA - 1993// TI - Empirical tests of some predictions from coalescent theory with applications to intraspecific phylogeny reconstruction JO - Genetics VL - 134 ID - Crandall1993 ER - TY - JOUR AU - Posada, D. AU - Crandall, K. A. AU - Templeton, A. R. PY - 2000 DA - 2000// TI - GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes JO - Mol Ecol VL - 9 ID - Posada2000 ER - TY - JOUR AU - Knowles, L. L. AU - Maddison, W. P. PY - 2002 DA - 2002// TI - Statistical phylogeography JO - Molecular Ecology VL - 11 ID - Knowles2002 ER - TY - JOUR AU - Petit, R. J. PY - 2008 DA - 2008// TI - On the falsifiability of the nested clade phylogeographic analysis method JO - Molecular Ecology VL - 17 ID - Petit2008 ER - TY - JOUR AU - Panchal, M. AU - Beaumont, M. A. PY - 2007 DA - 2007// TI - The automation and evaluation of nested clade phylogeographic analysis JO - Evolution VL - 61 ID - Panchal2007 ER - TY - JOUR AU - Templeton, A. R. PY - 2008 DA - 2008// TI - Nested clade analysis: an extensively validated method for strong phylogeographic inference JO - Molecular Ecology VL - 17 ID - Templeton2008 ER - TY - JOUR AU - Garrick, R. C. AU - Dyer, R. J. AU - Beheregaray, L. B. AU - Sunnucks, P. PY - 2008 DA - 2008// TI - Babies and bathwater: a comment on the premature obituary for nested clade phylogeographical analysis JO - Molecular Ecology VL - 17 ID - Garrick2008 ER - TY - JOUR AU - Ihaka, R. AU - Gentleman, R. PY - 1996 DA - 1996// TI - R: A Language for Data Analysis and Graphics JO - Journal of Computational and Graphical Statistics VL - 5 ID - Ihaka1996 ER - TY - JOUR AU - Akaike, H. PY - 1974 DA - 1974// TI - A new look at the statistical model identification JO - IEEE Transactions on Automatic Control VL - AC-19 ID - Akaike1974 ER - TY - CHAP AU - Pond, S. L. K. AU - Frost, S. D. W. AU - Muse, S. V. PY - 2005 DA - 2005// BT - HyPhy: hypothesis testing using phylogenies ID - Pond2005 ER - TY - JOUR AU - Harpending, H. PY - 1994 DA - 1994// TI - Signature of ancient population growth in a low-resolution mitochondrial DNA mismatch distribution JO - Hum Biol VL - 66 ID - Harpending1994 ER - TY - JOUR AU - Durka, W. AU - Bossdorf, O. AU - Prati, D. AU - Auge, H. PY - 2005 DA - 2005// TI - Molecular evidence for multiple introductions of garlic mustard (Alliaria petiolata, Brassicaceae) to North America JO - Molecular Ecology VL - 14 ID - Durka2005 ER - TY - JOUR AU - Fu, Y. X. PY - 1996 DA - 1996// TI - New Statistical Tests of Neutrality for DNA Samples From a Population JO - Genetics VL - 143 ID - Fu1996 ER - TY - JOUR AU - Watterson, G. A. PY - 1975 DA - 1975// TI - On the number of segregating sites in genetical models without recombination JO - Theoretical Population Biology VL - 7 ID - Watterson1975 ER - TY - JOUR AU - Tamura, K. AU - Nei, M. PY - 1993 DA - 1993// TI - Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees JO - Mol Biol Evol VL - 10 ID - Tamura1993 ER - TY - JOUR AU - Riley, S. P. D. AU - Pollinger, J. P. AU - Sauvajot, R. M. AU - York, E. C. AU - Bromley, C. AU - Fuller, T. K. AU - Wayne, R. K. PY - 2006 DA - 2006// TI - A southern California freeway is a physical and social barrier to gene flow in carnivores JO - Molecular Ecology VL - 15 ID - Riley2006 ER - TY - JOUR AU - Joy, D. A. AU - Feng, X. AU - Mu, J. AU - Furuya, T. AU - Chotivanich, K. AU - Krettli, A. U. AU - Ho, M. AU - Wang, A. AU - White, N. J. AU - Suh, E. AU - Beerli, P. AU - Su, X. Z. PY - 2003 DA - 2003// TI - Early Origin and Recent Expansion of Plasmodium falciparum JO - Science VL - 300 ID - Joy2003 ER - TY - JOUR AU - Smith, G. R. PY - 1992 DA - 1992// TI - Introgression in Fishes: Significance for paleontology, cladistics, and evolutionary rates JO - Systematic Biology VL - 41 ID - Smith1992 ER - TY - JOUR AU - McCusker, M. R. AU - Parkinson, E. AU - Taylor, E. B. PY - 2000 DA - 2000// TI - Mitochondrial DNA variation in rainbow trout (Oncorhynchus mykiss) across its native range: testing biogeographical hypotheses and their relevance to conservation JO - Molecular Ecology VL - 9 ID - McCusker2000 ER -