The cost of wobble translation in fungal mitochondrial genomes: integration of two traditional hypotheses

Table 4 tRNAs translating two-fold codon families in the nuclear genome of Saccharomyces cerevisiae.

AA*	Codon^†	T^‡	F^§
Arg	AGA	11	314
Arg	AGG	1	1
Gln	CAA	9	153
Gln	CAG	1	1
Glu	GAA	14	305
Glu	GAG	2	5
Leu	UUA	7	42
Leu	UUG	10	359
Lys	AAA	7	65
Lys	AAG	14	483
Asn	AAC	10	208
Asn	AAU	0	11
Asp	GAC	16	202
Asp	GAU	0	112
Cys	UGC	4	3
Cys	UGU	0	39
His	CAC	7	102
His	CAU	0	25
Phe	UUC	10	168
Phe	UUU	0	19
Ser	AGC	2	6
Ser	AGU	0	4
Tyr	UAC	8	141
Tyr	UAU	0	10

* Amion acid carried by tRNA
^† Codons forming Watson-Crick base pair with the anticodon of tRNA
^‡ Copy number of tRNA gene with anticodon matching the corresponding codon.
^§ Codon frequencies of highly expressed yeast protein-coding genes compiled in the Eyeastcai.cut file distributed with EMBOSS [44].

ISSN: 2730-7182

AA*	Codon^†	T^‡	F^§
Arg	AGA	11	314
Arg	AGG	1	1
Gln	CAA	9	153
Gln	CAG	1	1
Glu	GAA	14	305
Glu	GAG	2	5
Leu	UUA	7	42
Leu	UUG	10	359
Lys	AAA	7	65
Lys	AAG	14	483
Asn	AAC	10	208
Asn	AAU	0	11
Asp	GAC	16	202
Asp	GAU	0	112
Cys	UGC	4	3
Cys	UGU	0	39
His	CAC	7	102
His	CAU	0	25
Phe	UUC	10	168
Phe	UUU	0	19
Ser	AGC	2	6
Ser	AGU	0	4
Tyr	UAC	8	141
Tyr	UAU	0	10

AA*	Codon^†	T^‡	F^§
Arg	AGA	11	314
Arg	AGG	1	1
Gln	CAA	9	153
Gln	CAG	1	1
Glu	GAA	14	305
Glu	GAG	2	5
Leu	UUA	7	42
Leu	UUG	10	359
Lys	AAA	7	65
Lys	AAG	14	483
Asn	AAC	10	208
Asn	AAU	0	11
Asp	GAC	16	202
Asp	GAU	0	112
Cys	UGC	4	3
Cys	UGU	0	39
His	CAC	7	102
His	CAU	0	25
Phe	UUC	10	168
Phe	UUU	0	19
Ser	AGC	2	6
Ser	AGU	0	4
Tyr	UAC	8	141
Tyr	UAU	0	10

AA*	Codon^†	T^‡	F^§
Arg	AGA	11	314
Arg	AGG	1	1
Gln	CAA	9	153
Gln	CAG	1	1
Glu	GAA	14	305
Glu	GAG	2	5
Leu	UUA	7	42
Leu	UUG	10	359
Lys	AAA	7	65
Lys	AAG	14	483
Asn	AAC	10	208
Asn	AAU	0	11
Asp	GAC	16	202
Asp	GAU	0	112
Cys	UGC	4	3
Cys	UGU	0	39
His	CAC	7	102
His	CAU	0	25
Phe	UUC	10	168
Phe	UUU	0	19
Ser	AGC	2	6
Ser	AGU	0	4
Tyr	UAC	8	141
Tyr	UAU	0	10