Gene | Function | Recombination evidence(2) (p-value) | Positive selection evidence(3) (p-value) | ω(4) | p(5) | BEB(6) sites (probability) |
---|---|---|---|---|---|---|
cheA | Two-component sensor histidine kinase CheA, involved in chemotaxis (Dons et al., 2004) | GENECONV (< 0.001), NSS (< 0.001), Max χ2 (< 0.001), PHI (< 0.001) | LIIIA/C-LI (< 0.001) | ∞ | 0.002 | 140 (98%); |
lmo0693 | Putative flagellar motor switch protein, involved in motility | NSS (0.033) | LII (< 0.001) | ∞ | 0.022 | 17 (73%) 18 (98%) |
flaR | Histone like-DNA topology modulator, involved in regulation of flagellin expression (Sanchez-Campillo et al., 1995) | GENECONV (0.010), Max χ2(0.010), PHI (0.005) | LII (0.002) | 14.1 | 0.046 | 4 (90%) 12 (99%) 68 (80%) |
phoP | Putative two-component response phosphate regulator PhoP | GENECONV (0.014), NSS (0.001), Max χ2 (0.020), PHI (0.003) | - | - | - | - |
lmo2537 | Putative UDP-N- acetylglucosamine-2-epimerase, involved in teichoic acid biogenesis (Dubail et al., 2006) | GENECONV (< 0.001), NSS (< 0.001), Max χ2 (< 0.001), PHI (< 0.001) | - | - | - | - |