Table 1 Position of Aquificales in phylogenies built from single genes present in the concatenated alignment
Position in the genome (locus index) | Gene name | Phylogeny: group neighbouring Aquificales |
|---|---|---|
8 | rpsJ | Thermotogales |
11 | rplD | Deinococcus/Thermus |
13 | rplB | Fusobacterium nucleatum |
16 | rplV | Thermoanaerobacter tengcongensis |
17 | rpsC | Thermotogales |
18 | rplP | Planctomycetes |
20 | rpsQ | Chloroflexi |
73 | rpsK | Planctomycetes |
74 | rpsM | a clade comprising spirochaetes and Bacteroidetes/Chlorobi |
123 | rpsP | Bdellovibrio |
226 | rpsO | Planctomycetes |
287 | smb | Thermotogales |
461 | gatB | Thermotogales |
609 | hypothetical protein | Clostridiales |
712 | frr | Chloroflexi |
735 | rpsL2 | Thermotogales |
792 | cycB1 | a clade comprising Thermoanaerobacter tengcongensis and Bdellovibrio |
946 | rnc | Thermotogales |
1478 | recR | Leptospira interogans |
1489 | trmD | Thermotogales |
1493 | dnaG | a clade comprising Spirochaetes and Thermotogales |
1645 | rpsE | Deinococcus/Thermus |
1648 | rplR | Clostridiales |
1649 | rplF | Thermotogales |
1651 | rpsH | a clade comprising Thermotogales and Deinococcus/Thermus |
1652 | rplE | Actinobacteria |
1654 | rplN | Mycoplasma |
1767 | rpsT | Proteobacteria |
1773 | rpmA | Borrelia |
1777 | infC | Leptospira interogans |
1832 | rpsG1 | Thermotogales |
1878 | rpsI | Desulfotalea psychrophila |
1919 | era2 | Thermotogales |
1933 | rplK | Thermotogales |
1935 | rplA | Chloroflexi |
1939 | rpoB | Campylobacter jejuni |
1945 | rpoC | Campylobacter jejuni |
2007 | rpsB | a clade comprising Thermotogales and Cyanobacteria |
2032 | infB | a clade comprising Proteobacteria, Bacteroidetes-Chlorobi, Spirochaetes, Chlamydiales |
2042 | rplI | a clade comprising delta-Proteobacteria, Chloroflexi, and Planctomycetes |