Table 2 Pfam families corresponding to structural Bet v 1-related families.
From: The Bet v 1 fold: an ancient, versatile scaffold for binding of large, hydrophobic ligands
Family name | Pfam family | Number of sequences in Pfam | Range of percent sequence identity/similarity to Bet v 1 |
|---|---|---|---|
Bet v 1 family | Pathogenesis-related protein Bet v I family [Pfam:PF00407] | 520 | 9–100/15–100 |
START domain | START domain [Pfam:PF01852] | 522 | 1–20/1–30 |
Ring hydroxylases α-chain | Ring hydroxylating alpha subunit (catalytic domain) [Pfam:PF00848] | 1156 | 0–19/0–33 |
Phosphatidylinositol transfer proteins | Phosphatidylinositol transfer protein [Pfam:PF02121] | 104 | 1–16/1–27 |
AHA1 domain | Activator of Hsp90 ATPase homolog 1-like protein [Pfam:PF08327] | 617 | 0–23/0–35 |
Polyketide cyclases | Polyketide cyclase/dehydrase and lipid transport [Pfam:PF03364] | 908 | 0–22/1–35 |
SMU440-related | [PfamB:PB094079] | 2 | 4–19/9–33 |
PA1206-related | Domain of unknown function (DUF1857) [Pfam:PF08982] | 36 | 3–22/4–38 |
Homotrimeric ring hydroxylases | [PfamB:PB024837] | 7 | 10–14/19–24 |
CalC-related | [PfamB:PB077055] + [PfamB:PB048144] | 3 | 8–17/12–32 |
CoxG family | Carbon monoxide dehydrogenase subunit G (CoxG) [Pfam:PF06240] | 176 | 1–24/2–38 |