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Table 5 Apapane allelic diversity (A), expected (HE) and observed (HO) heterozygosity, and estimated frequencies of null alleles (N).

From: Genetic structure along an elevational gradient in Hawaiian honeycreepers reveals contrasting evolutionary responses to avian malaria

low-BRY, MAL, NAN (n = 12)

Mid-COO (n = 53)

Mid-CRA (n = 16)

Locus

A

HO

HE

N

A

HO

HE

N

A

HO

HE

N

3A2C

10

0.750

0.873

-

14

0.717

0.865

0.083

13

0.563

0.899

0.178

11B1C

12

1.000

0.931

-

15

0.906

0.872

-

11

0.875

0.887

-

5A5A

8

0.750

0.789

-

17

0.906

0.882

-

14

0.938

0.935

-

4A4E

5

0.600

0.663

-

13

0.600

0.829

0.130

7

0.400

0.731

0.193

11B4E

5

0.750

0.710

-

6

0.698

0.733

-

6

0.625

0.752

-

12B5E

7

0.917

0.869

-

21

0.887

0.918

-

12

0.875

0.908

-

5A1B

7

0.833

0.837

-

12

0.736

0.879

0.075

11

0.688

0.905

0.106

Hvir65

3

0.333

0.625

0.204

9

0.679

0.689

-

5

0.750

0.653

-

Hvir66

11

1.000

0.920

-

14

0.906

0.924

-

12

0.938

0.926

-

Hvir94

2

0.333

0.289

-

3

0.528

0.513

-

2

0.375

.0508

-

Hvir107

6

0.917

0.840

-

14

0.774

0.889

-

8

0.625

0.873

0.128

Hvir62

3

0.500

0.423

-

4

0.377

.0342

-

3

0.188

0.179

-

Avg

6.6

0.724

0.731

 

11.8

0.726

0.778

 

8.7

0.653

0.763

 
 

mid-PUU (n = 30)

mid-WAI (n = 8)

    

Locus

A

H O

H E

N

A

H O

H E

N

    

3A2C

12

0.567

0.866

0.166

7

0.750

0.850

-

    

11B1C

14

0.867

0.886

-

7

0.875

0.841

-

    

5A5A

13

0.833

0.884

-

7

0.875

0.850

-

    

4A4E

12

0.607

0.844

0.137

6

0.625

0.783

-

    

11B4E

6

0.867

0.760

-

5

1.000

0.813

-

    

12B5E

17

0.862

0.913

-

10

1.000

0.934

-

    

5A1B

13

0.700

0.906

0.106

6

0.750

0.850

-

    

Hvir65

5

0.700

0.691

-

5

0.875

0.733

-

    

Hvir66

13

0.967

0.919

-

10

1.000

0.925

-

    

Hvir94

2

0.467

0.508

-

3

0.500

0.491

-

    

Hvir107

14

0.833

0.890

-

6

0.714

0.857

-

    

Hvir62

5

0.267

0.299

-

2

0.250

0.234

-

    

Avg

10.5

0.711

0.781

 

8.7

0.653

0.763

     
 

high-CJR (n = 62)

high-SOL (n = 64)

    

Locus

A

H O

H E

N

A

H O

H E

N

    

3A2C

15

0.738

0.905

0.086

14

0.776

0.896

0.062

    

11B1C

13

0.839

0.886

-

13

0.862

0.893

-

    

5A5A

17

0.855

0.893

-

16

0.917

0.880

-

    

4A4E

15

0.672

0.824

0.083

13

0.576

0.846

0.150

    

11B4E

6

0.705

0.766

-

6

0.695

0.723

-

    

12B5E

20

0.968

0.907

-

22

0.931

0.901

-

    

5A1B

15

0.836

0.897

-

15

0.763

0.891

0.067

    

Hvir65

9

0.726

0.780

-

9

0.576

0.673

-

    

Hvir66

14

0.919

0.907

-

16

0.883

0.931

-

    

Hvir94

3

0.410

0.511

0.092

6

0.356

0.511

0.146

    

Hvir107

13

0.806

0.877

-

12

0.810

0.865

-

    

Hvir62

4

0.194

0.222

-

5

0.513

0.362

-

    

Avg

12.0

0.722

0.781

 

12.3

0.722

0.781

     
  1. Values that deviate significantly from expectations under Hardy Weinberg equilibrium are designated in bold italics.