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Figure 4 | BMC Evolutionary Biology

Figure 4

From: LineageSpecificSeqgen: generating sequence data with lineage-specific variation in the proportion of variable sites

Figure 4

Tree reconstruction accuracy for the simulated 4-taxon datasets, using JC+I+covarion model. The number of times with which each of the three possible 4-taxon trees was reconstructed, with the highest proportional frequency in the Bayesian analysis, assuming JC+I+covarion model. The higher the increase in the proportion of variable sites in lineages B and C, the lower the tree reconstruction accuracy.

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