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Table 1 Trichoderma/Hypocrea class II hydrophobin genes*

From: Purifying selection and birth-and-death evolution in the class II hydrophobin gene families of the ascomycete Trichoderma/Hypocrea

Trichoderma Section

Trichoderma/Hypocrea spp.

abbreviation

Scaffold

accession no.

Longibrachiatum

H. jecorina

HFB6

3:1189832–1190084

 
 

H. jecorina

HFB3

31:136511–136957

 
 

H. jecorina

HFB5

11:163081–163444

 
 

H. jecorina

HFB1

3:1189832–1190084

 
 

H. jecorina

HFB2

56:80872–81271

 
 

H. jecorina

HFB4

5:390006–390436

 
 

T. longibrachiatum

TL_1

L19T52P004R01376

[GenBank: AJ905782]

Trichoderma

T. asperellum

TA_1

L14T53P124R00732

[GenBank: AJ903054]

 

T. asperellum

TA_2

L14T53P129R00833

[GenBank: AJ903147]

 

T. asperellum

TA_3

L14T53P116R00634

[GenBank: AJ902899]

 

T. asperellum

TA_4

L14T53P135R01371

[GenBank: AJ903666]

 

H. atroviridis

HA_1b

1:719649–719242

[GenBank: EU053447]

 

H. atroviridis

HA_1c

1:1159027–1159456

GenBank: EU053448] [GenBank: EU053449];

 

H. atroviridis

HA_2a = SRH1

2:2051503–2051110

[GenBank: CAA72539]

 

H. atroviridis

HA_2b

2:2503511–2503091

[GenBank: EU053450]

 

H. atroviridis

HA_2c

2:3431445–3432224

[GenBank: EU053456]

 

H. atroviridis

HA_5a

5:343144–342721

[GenBank: EU053451]

 

H. atroviridis

HA_6a

6:627631–626945

[GenBank: EU053452]

 

H. atroviridis

HA_6b

6:738694–738316

[GenBank: EU053453]

 

H. atroviridis

HA_6c

6:1048590–1048979

[GenBank: EU053454]

 

H. atroviridis

HA_22a

22:79408–78987

[GenBank: EU053455]

 

T. cf. Koningiopsis

TCK_1

L21T78P020R01908

[GenBank: AJ909436]

 

T. cf. Koningiopsis

TCK_2

L21T78P014R01340

[GenBank: EV554903]

 

T. cf. Koningiopsis

TCK_3

L21T78P012R01144

[GenBank: EV554904]

Pachybasium

H. virens

HV_1a

1:2048115–2048517

[GenBank: EU053457]

 

H. virens

HV_1b

1:2185848–2186274

[GenBank: EU053458]

 

H. virens

HV_1c

1:1718557–1718103

[GenBank: EU053459]

 

H. virens

HV_1d

1:909158–909955

[GenBank: EU053460]

 

H. virens

HV_2a

2:562868–563256

[GenBank: EU053461]

 

H. virens

HV_13a

13:955443–955019

[GenBank: EU053462]

 

H. virens

HV_18a

18:175336–174917

[GenBank: EU053463]

 

H. virens

HV_21a

21:388893–389498

[GenBank: EU053464]

 

H. virens

HV_22a

22:232164–232586

[GenBank: EU053465]

 

H. lixii

HL_1

L03T34P016R01491

[GenBank: AJ896766]

 

H. lixii

HL_2

L02T34P126R11028

[GenBank: AJ896364]

 

H. lixii

HL_3

L03T34P047R04364

[GenBank: AJ897108]

 

H. lixii

QID3

 

[GenBank: X71913.1]

 

H. lixii

HL_4

 

[GenBank: ABN64104]

 

T. aggressivum var. europeae

TAE_1

L50TH2P009R00852

[GenBank: ES768856]

 

T. aggressivum var. europeae

TAE_2

L50TH2P018R01702

[GenBank: ES768855]

 

T. aggressivum var. europeae

TAE_3

L50TH2P001R00008

[GenBank: AJ904501]

 

T. stromaticum

TS_1

L55TSTP002R00109

[GenBank: ES768859]

  1. No accession numbers are given for H. jecorina, because its genome genome is available online; genome and EST data were obtained from the following strains: H. jecorina QM6a; H. atroviridis IMI 206040; H. virens, Gv 29-8; T. asperellum T53, T. longibrachiatum T52; T. aggressivum var. europeae CBS 453.93 H. lixii CECT 2413; T. cf. koningiopsis T78; T. stromaticum CBS 101875.
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BMC Ecology and Evolution

ISSN: 2730-7182

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