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Table 1 The estimated relative occurrence of selected ectomycorrhizal genera in GenBank based on ITS sequences

From: Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)

EM genus

# of studies

# of UID sequences

# of ID sequences

# of ID species

Arcangeliella

0

0

3

2

Bankera

0

0

1

1

Phellodon

0

0

2

2

Sarcodon

1

1

17

4

Cantharellus

1

1

22

5

Descomyces

1

30

7

3

Alpova

1

2

3

2

Albatrellus

3

4

35

11

Hydnellum

5

9

19

15

Craterellus

7

126

7

3

Scleroderma

9

14

4

3

Xerocomus

10

18

65

9

Hygrophorus

10

28

31

21

Pisolithus

12

68

142

7

Tomentellopsis

14

27

23

4

Pseudotomentella

16

25

12

6

Amphinema

18

61

4

1

Suillus

22

39

177

50

Tylospora

23

78

16

2

Hebeloma

25

55

117

60

Boletus

25

38

131

31

Amanita

26

51

222

84

Cenococcum

27

178

64

1

Tricholoma

29

93

286

60

Piloderma

30

257

44

3

Thelephora

31

63

20

8

Rhizopogon

31

316

184

51

Tuber

34

64

787

28

Inocybe 1

42

156

31

23

Lactarius

48

226

272

89

Inocybe 2

48

181

293

116

Sebacina

53

159

16

9

Russula

73

343

259

136

Cortinarius

74

521

828

398

Tomentella

79

463

73

26

  1. 1 Before addition of fully identified Inocybe sequences to emerencia in this study.
  2. 2 After addition of fully identified Inocybe sequences to emerencia in this study.
  3. Number (#) of distinct studies with unidentified sequences associated with the respective ectomycorrhizal (EM) genera (used to order the table), the number of unidentified (UID) sequences the genera constitute the closest BLAST match for, and the number of fully identified (ID) sequences belonging to them. Based on GenBank data as of 2006-10-19.