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Table 1 The estimated relative occurrence of selected ectomycorrhizal genera in GenBank based on ITS sequences

From: Mining metadata from unidentified ITS sequences in GenBank: A case study in Inocybe (Basidiomycota)

EM genus # of studies # of UID sequences # of ID sequences # of ID species
Arcangeliella 0 0 3 2
Bankera 0 0 1 1
Phellodon 0 0 2 2
Sarcodon 1 1 17 4
Cantharellus 1 1 22 5
Descomyces 1 30 7 3
Alpova 1 2 3 2
Albatrellus 3 4 35 11
Hydnellum 5 9 19 15
Craterellus 7 126 7 3
Scleroderma 9 14 4 3
Xerocomus 10 18 65 9
Hygrophorus 10 28 31 21
Pisolithus 12 68 142 7
Tomentellopsis 14 27 23 4
Pseudotomentella 16 25 12 6
Amphinema 18 61 4 1
Suillus 22 39 177 50
Tylospora 23 78 16 2
Hebeloma 25 55 117 60
Boletus 25 38 131 31
Amanita 26 51 222 84
Cenococcum 27 178 64 1
Tricholoma 29 93 286 60
Piloderma 30 257 44 3
Thelephora 31 63 20 8
Rhizopogon 31 316 184 51
Tuber 34 64 787 28
Inocybe 1 42 156 31 23
Lactarius 48 226 272 89
Inocybe 2 48 181 293 116
Sebacina 53 159 16 9
Russula 73 343 259 136
Cortinarius 74 521 828 398
Tomentella 79 463 73 26
  1. 1 Before addition of fully identified Inocybe sequences to emerencia in this study.
  2. 2 After addition of fully identified Inocybe sequences to emerencia in this study.
  3. Number (#) of distinct studies with unidentified sequences associated with the respective ectomycorrhizal (EM) genera (used to order the table), the number of unidentified (UID) sequences the genera constitute the closest BLAST match for, and the number of fully identified (ID) sequences belonging to them. Based on GenBank data as of 2006-10-19.