Figure 3

Overall and branch-specific relative transition (red) and transversion (blue) mutation rates (substitutions per 100 bases) for different genomic regions, and branch-specific dN/dS ratios (number below branch). Table includes number of pairwise (with F. grandis) synonymous (S) or amino-acid replacing (R) and fixed (F) or polymorphic (P) mutations, including neutrality index (NI) from McDonald Kreitman (MK) test performed in dnaSP. Significance of MK is tested is indicated as follows; * 0.01 < P < 0.05; ** 0.001 < P < 0.01; *** P < 0.001 for Fisher's exact test with Bonferroni correction for multiple tests. Colored lines indicate lineages referred to in Figure 5.