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Table 1 SAP30 family proteins used for amino acid sequence alignment.

From: Phylogenetic analysis of the SAP30 family of transcriptional regulators reveals functional divergence in the domain that binds the nuclear matrix

Number

Name

Identifier

Organism

Taxonomy

Description

1

Hs30

gi|4506783

Homo sapiens

Eu., mt., vt., mam.

SAP30

2

Mam30

gi|109076181

Macaca mulatta

Eu., mt., vt., mam.

PREDICTED: similar to SAP30 isoform 2

3

Pt30

gi|114596884

Pan troglodytes

Eu., mt., vt., mam.

PREDICTED: SAP30 isoform 2

4

Bt30

gi|119896054

Bos taurus

Eu., mt., vt., mam.

PREDICTED: similar to SAP30

5

Mm30

gi|12408290

Mus musculus

Eu., mt., vt., mam.

SAP30

6

Cf30

gi|73993665

Canis familiaris

Eu., mt., vt., mam.

PREDICTED: similar to SAP30

7

Oa30

gi|149412039

Ornithorhynchus anatinus

Eu., mt., vt., mam.

PREDICTED: SAP30

8

Md30

gi|126331237

Monodelphis domestica

Eu., mt., vt., mam.

PREDICTED: similar to SAP30

9

Gg30

gi|118090131

Gallus gallus

Eu., mt., vt., av.

PREDICTED: similar to SAP30

10

Xt30

gi|62860074

Xenopus tropicalis

Eu., mt., vt., amp.

SAP30

11

Xl30

gi|148227208

Xenopus laevis

Eu., mt., vt., amp.

MGC99111 protein

12

Hs30L

gi|74734226

Homo sapiens

Eu., mt., vt., mam.

SAP30L, NS4ATP2, FLJ11526

13

Mam30L

gi|109079479

Macaca mulatta

Eu., mt., vt., mam.

Predicted: similar to SAP30L

14

Bt30L

gi|119923830

Bos taurus

Eu., mt., vt., mam.

Predicted: hypotethical protein

15

Mm30L

gi|124487193

Mus musculus

Eu., mt., vt., mam.

SAP30L

16

Rn30L

gi|109490760

Rattus norvegicus

Eu., mt., vt., mam.

PREDICTED: similar to SAP30L

17

Gg30L

gi|118097434

Gallus gallus

Eu., mt., vt., av.

Predicted: hypotethical protein

18

Xt30L

gi|62858467

Xenopus tropicalis

Eu., mt., vt., amp.

hypothetical protein LOC549895

19

Xl30L

gi|160358663

Xenopus laevis

Eu., mt., vt., amp.

SAP30L-A

20

Dr30L

gi|47550711

Danio rerio

Eu., mt., vt., acti.

SAP30L

21

Tn30L

gi|47221378

Tetraodon nigroviridis

Eu., mt., vt., acti.

unnamed protein product

22

Aa30L

gi|157112936

Aedes aegypti

Eu., mt., art., ins.

SAP30

23

Ag30L

gi|118794370

Anopheles gambiae str. PEST

Eu., mt., art., ins.

AGAP001654-PA

24

Am30L

gi|66509501

Apis mellifera

Eu., mt., art., ins.

PREDICTED: similar to CG4756-PA

25

Dp30L

gi|125983642

Drosophila pseudoobscura

Eu., mt., art., ins.

GA18408-PA SAP30

26

Dm30L

gi|18859859

Drosophila melanogaster

Eu., mt., art., ins.

CG4756-PA SAP30

27

Tc30L

gi|91080611

Tribolium castaneum

Eu., mt., art., ins.

PREDICTED: similar to CG4756-PA

28

Sp30L

gi|115610671

Strongylocentrotus purpuratus

Eu., mt., ech

PREDICTED: similar to Sap30-like

29

Nv30L

gi|156369622

Nematostella vectensis

Eu., mt., cnid.

predicted protein

30

Dd30L

gi|66810369

Dictyostelium discoideum AX4

Eu., myc.

hypothetical protein DDBDRAFT_0185724

31

Vv30L

gi|157335386

Vitis vinifera

Eu., virid., strept.

unnamed protein product

32

Vp30L

gi|85070180

Vitis pseudoreticulata

Eu., virid., strept.

unknown

33

At30L

gi|18394724

Arabidopsis thaliana

Eu., virid., strept.

unknown protein

34

At30L-B

gi|145327243

Arabidopsis thaliana

Eu., virid., strept.

unknown protein

35

Osj30L

gi|78708341

Oryza sativa (japonica cultivar-group)

Eu., virid., strept.

expressed protein

36

Osj30L-B

gi|115457076

Oryza sativa (japonica cultivar-group)

Eu., virid., strept.

Os04g0166600

37

Cr30L

gi|159464042

Chlamydomonas reinhardtii

Eu., virid., chlor.

hypothetical protein CHLREDRAFT_190150

38

Ol30L

gi|145350235

Ostreococcus lucimarinus CCE9901

Eu., virid., chlor.

predicted protein

39

Ot30L

gi|116059598

Ostreococcus tauri

Eu., virid., chlor.

unnamed protein product

40

Yl30L

gi|50556448

Yarrowia lipolytica

Eu., Fungi, sacch.

hypothetical protein

41

Asg30L

gi|45190881

Ashbya gossypii ATCC 10895

Eu., Fungi, sacch.

AER278Wp

42

Kl30L

gi|50308899

Kluyveromyces lactis

Eu., Fungi, sacch.

unnamed protein product

43

Cg30L

gi|50288935

Candida glabrata

Eu., Fungi, sacch.

unnamed protein product

44

Vap30L

gi|156845457

Vanderwaltozyma polyspora DSM 70294

Eu., Fungi, sacch.

hypothetical protein Kpol_541p4

45

Ps30L

gi|126136507

Pichia stipitis CBS 6054

Eu., Fungi, sacch.

predicted protein

46

Sc30L

gi|6323919

Saccharomyces cerevisiae

Eu., Fungi, sacch.

SAP30

47

Dh30L

gi|50425161

Debaryomyces hansenii CBS767

Eu., Fungi, sacch.

hypothetical protein DEHA0F20284g

48

Pg30L

gi|146421845

Pichia guilliermondii ATCC 6260

Eu., Fungi, sacch.

hypothetical protein PGUG_00243

49

Ca30L

gi|68489492

Candida albicans SC5314

Eu., Fungi, sacch.

putative SAP30

50

Le30L

gi|149237879

Lodderomyces elongisporus NRRL YB-4239

Eu., Fungi, sacch.

conserved hypothetical protein

51

Bf30L

gi|154298394

Botryotinia fuckeliana B05.10

Eu., Fungi, pez.

hypothetical protein BC1G_11652

52

Ci30L

gi|119178679

Coccidioides immitis RS

Eu., Fungi, pez.

hypothetical protein CIMG_08147

53

Chg30L

gi|116196544

Chaetomium globosum CBS 148.51

Eu., Fungi, pez.

hypothetical protein CHGG_04870

54

Ac30L

gi|121715712

Aspergillus clavatus NRRL 1

Eu., Fungi, pez.

conserved hypothetical protein

55

Af30L

gi|71001656

Aspergillus fumigatus Af293

Eu., Fungi, pez.

conserved hypothetical protein

56

An30L

gi|145232103

Aspergillus niger

Eu., Fungi, pez.

hypothetical protein An02g03790

57

Scc30L

gi|156045101

Sclerotinia sclerotiorum 1980

Eu., Fungi, pez.

hypothetical protein SS1G_09739

58

Nf30L

gi|119481227

Neosartorya fischeri NRRL 181

Eu., Fungi, pez.

conserved hypothetical protein

59

Nc30L

gi|85105620

Neurospora crassa OR74A

Eu., Fungi, pez.

hypothetical protein

60

Ao30L

gi|83769778

Aspergillus oryzae

Eu., Fungi, pez.

unnamed protein product

61

Asn30L

gi|67540052

Aspergillus nidulans FGSC A4

Eu., Fungi, pez.

hypothetical protein AN6196.2

62

Pn30L

gi|160703739

Phaeosphaeria nodorum SN15

Eu., Fungi, pez.

hypothetical protein SNOG_12725

  1. Note that the S. cerevisiae SAP30 is judged to be SAP30L (see data presented below) and named as such (Sc30L) for coherence. acti. = Actinopterygii, amp. = Amphibia, art. = Arthropoda, eu. = Eukaryota, ins. = Insecta, invt = Invertebrata, mam. = Mammalia, mt = Metazoa, vt = Vertebrata, av. = Aves, ech. = Echinodermata, cnid. = Cnidaria, myc. = Mycetozoa, virid. = Viridiplantae, chlor. = Chlorophyta, strept. = Streptophyta, sacch. = Saccharomycotina, pez. = Pezizomycotina.