Table 1 Overview of the data and data sources used in this study
From: HaMStR: Profile hidden markov model based search for orthologs in ESTs
Proteins | Â |
|---|---|
InParanoid a | Homo sapiens |
| Â | Monodelphis domestica |
| Â | Ciona intestinalis |
| Â | Drosophila melanogaster |
| Â | Caenorhabditis elegans |
| Â | Saccharomyces cerevisiae |
| Â | Debaryomyces hansenii |
| Â | Kluyveromyces lactis |
| Â | Candida glabrata |
| Â | Yarrowia lipolytica |
Broad Institute b | Uncinocarpus reesii |
| Â | Stagonospora nodorum |
| Â | Chaetomium globosum |
| Â | Clavispora lusitaniae (Candida lusitaniae) |
| Â | Pichia guillermondii (Candida guillermondii) |
| Â | Candida tropicalis |
| Â | Candida albicans |
UniProt c | Aspergillus fumigatus |
| Â | Aspergillus terreus |
| Â | Aspergillus oryzae |
| Â | Ashbya gossypii |
Genoscope d | Podospora anserina |
ESTs | Â |
dbEST e | Ustilago maydis (39308) |
| Â | Cryptococcus neoformans (59041) |
| Â | Phanerochaete chrysosporium (13189) |
| Â | Coprinopsis cinerea (15715) |
| Â | Schizosaccharomyces pombe (8123) |
| Â | Ajellomyces capsulatus (26389) |
| Â | Neurospora crassa (20089) |
| Â | Trichoderma atroviride (1656) |
| Â | Trichoderma asperellum (1882) |
| Â | Trichoderma harzianum (12165) |
| Â | Fusarium oxysporum (9248) |
| Â | Bortrytis cinerea (10982) |
| Â | Sclerotinia sclerotiorum (1494) |
| Â | Fusarium graminearum (6678) |
TGI f | Coccidioides immitis (9312) |
| Â | Aspergillus nidulans (13100) |
| Â | Fusarium verticillioides (11126) |
| Â | Magnaporthe grisea (20890) |