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Table 4 Adapters and Primers used in C genome specific sequence preparation

From: Polyploid evolution in Oryza officinalis complex of the genus Oryza

sequence name

primer name

Sequence(5'-3')

CS-1

CS1-F

TTTCCCAATCAAGTTCCT

 

CS1-R

ACGGTGGTAATGGTAGCC

CS-2

CS2-F

AAACAGCAGCGGAAAGAG

 

CS2-R

GCAAATAGCCATAAGCC

CS-3

CS3-F

CAAACCCAAACCACCCAAGC

 

CS3-R

GAACCATACCATCGCCGTCA

CS-4

CS4-F

CTGGTGCCTGCTTTAGTC

 

CS4-R

CCATACCGTTGCCTCTTA

CS-5

CS5-F

ACGACCAAGCCGACCAAC

 

CS5-R

TGCCTCTTCCACCACTAACT

CS-6

CS6-F

GCTTTGGGTTGGACTTGAC

 

CS6-R

TGAACTCGGTGAGATTGGA

CS-7

CS7-F

GGCTGACTGAAGGGAGGAGG

 

CS7-R

TGAGGTTGGACGCTGGACTG

CS-8

CS8-F

ATCATTCATTGCTCCATTC

 

CS8-R

AACAGCGTCCTCACCAG

adapter-C

C-adp1

GACCTCGTGTCTGCGTACC

 

C-adp2

TAGGTACGCAGACACGAG

adapter-B

B-adp1*

GACGATGAGTCCTGAG

 

B-adp2

TACTCAGGACTCAT

  1. * 5' end biotinylated