Divergence time parameters | Prior distribution | ||
---|---|---|---|
t1 | First splitting time | Uniform (0, 2 My) | |
t2 | Second splitting time | t1 values + Uniform (0, 1.5 My) | |
t3 | Third splitting time | t2 values + Uniform (0, 1.5 My) | |
t4 | Fourth splitting time | t3 values + Uniform (0, 2 My) | |
t5 | Fifth splitting time | t4 values + Uniform (0, 5 My) | |
Marker Hyper-parameters | Mutation rate for mtDNA standard | slower | |
Ï‘STRm | mean of mutation rate for STR locus | Normal (-3.5, 0.25) | Normal (-3.5, 0.25) |
Ï‘STRsd | st. dev. of mutation rate for STR locus | Abs [Normal (0, 0.5)] | Abs [Normal (0, 0.5)] |
Ï‘SNPm | mean of mutation rate for mtDNA locus | Normal (-4.630784, 0.25) | Normal (-5.267606, 0.25) |
Ï‘SNPsd | st. dev. of mutation rate for mtDNA locus | Abs [Normal (0, 0.5)] | Abs [Normal (0, 0.5)] |