Primer name | Primer sequence |
---|---|
For amplifying BnFT probe from Tapidor genome | |
AtFT1 | 5'ACCCTCACCTCCGAGAATATCT3' |
AtFT2 | 5'AGCCACTCTCCCTCTGACAAT3' |
For isolating BnFT sequences from positive BACs | |
BrFT1 | 5'AGTTGTAGGAGACGTTCTTGA3' |
BrFT2 | 5'AGATATTCTCGGAGGTGAGGAT3' |
BrFT2-3 | 5'ATGGTGGATCCAGATGTTCCAA3' |
BrFT4 | 5'AGCCACTCTCCCTCTGACAAT3' |
BrFT1-5' | 5'TTGGCCGTATGTAACCCTTAGATCGAT3' |
BrFT4-3' | 5'ACAATTCAACACTCGTGAGTTTGCT3' |
For mapping BnFT paralogues | |
BnA2.FT-1 | 5'TCGAAGTGAGTAGGACTAGGT3' |
BnA2.FT-2 | 5'TGCTCTAAGTGACTCCAAAACA3' |
BnA7.FTa-1 | 5'CTCAGGTTCAAAACAAGCCAA 3' |
BnA7.FTa-2 | 5'GATATTCTCGGAGGTGAGGGTT3' |
BnA7.FTb-1 | 5'TGCATAGGAGACATCGAAGTT3' |
BnA7.FTb-2 | 5'AGTTCTATAGGAGTGGACACA3' |
BnC2.FT-1 | 5'ACCCTCACCTCCGAGAATATCT3' |
BnC2.FT-2 | 5'AGCCACTCTCCCTCTGACAAT3' |
BnC6.FTa-1 | 5'AGTAGGACCAGGTTTCCTGT3' |
BnC6.FTa-2 | 5'TGGTATGGTGCATGCATACT3' |
BnC6.FTb-1 | 5'ACGAGAATATCTCCATTGGT3' |
BnC6.FTb-2 | 5'TCCATGTCTAGTTGTGT3' |