Species table. List of species and their corresponding three-letter codes used in the analysis. The tree on the left represents the fungal species tree as described by a recent analysis . The names of the major fungal taxa, as provided by the source database, are indicated to the right of the tree. A list of synonyms for this species names is provided in the additional file 1. Sources of the sequences are: JGI http://www.jgi.doe.gov, Broad Institute http://broad.mit.edu, YGOB http://wolfe.gen.tcd.ie/ygob, SGD http://www.yeastgenome.org, Fungal Genomes http://fungalgenomes.org, Genolevures http://www.genolevures.org/, integr8 http://www.ebi.ac.uk/integr8, Candida genome database http://www.candidagenome.org, NCBI http://www.ncbi.nlm.nih.gov.