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Table 7 Control region mtDNA haplotypes (with numbered polymorphic sites), haplotype frequencies, shared haplotypes and indices of population diversity for Prionace glauca.

From: The extent of population genetic subdivision differs among four co-distributed shark species in the Indo-Australian archipelago

P. glauca haplotypes (373 bases) Total N = 60

Haplotype

2

5

8

9

1

1

1

2

2

2

2

2

Indonesia

(n = 19)

Mid-north Pacific

(n = 20)

West Australia

(n = 4)

East Australia

(n = 17)

 

7

2

6

7

4

8

9

2

2

4

5

6

    
     

5

1

0

7

8

2

5

7

    

   PG01

C

G

A

C

G

T

G

C

T

G

T

T

0.105

-

0.250

-

   PG02

.

.

.

.

.

.

.

T

.

.

.

.

0.158

0.150

-

0.176

   PG03

T

.

.

.

.

.

.

T

.

.

.

.

0.211

0.250

0.250

0.118

   PG04

.

.

.

.

.

C

.

T

.

.

.

.

0.105

0.100

0.250

-

   PG05

T

.

.

G

.

.

.

T

.

.

A

C

0.105

0.050

0.250

0.188

   PG06

.

.

.

G

.

.

.

T

.

.

A

C

0.211

0.150

-

0.294

   PG07

.

A

.

G

.

.

.

T

.

.

.

C

0.053

0.150

-

-

   PG08

T

.

.

.

.

C

.

T

C

.

.

.

-

-

-

0.059

   PG09

T

A

.

.

.

C

A

T

.

.

.

.

-

-

-

0.059

   PG10

T

A

.

.

A

.

.

T

.

.

.

.

-

0.050

-

-

   PG11

T

.

.

.

.

.

.

T

.

.

A

.

-

-

-

0.059

   PG12

.

A

G

G

.

.

.

T

.

.

A

C

0.053

-

-

-

   PG13

T

.

.

G

.

.

.

T

.

A

A

C

-

-

-

0.059

   PG14

.

.

.

G

.

.

.

T

.

.

.

C

-

-

-

0.059

   PG15

.

C

.

.

.

.

.

T

.

.

A

C

-

0.050

-

-

   PG16

T

.

.

.

.

.

.

.

.

.

.

.

-

0.050

-

-

Number of haplotypes

8

9

4

9

Number of polymorphic sites

8

8

6

9

Nucleotide diversity per location (within population, %)

0.740 ± 0.468

0.742 ± 0.458

0.878 ± 0.677

0.778 ± 481

Haplotype diversity per location (within population)

0.894 ± 0.037

0.895 ± 0.040

1.000 ± 0.177

0.890 ± 0.054

  1. Key: Haplotype PG01 has Genbank accession number FJ161689.