Table 1 GlnA protein sequence distribution and similarity in the Actinobacteria
| Â | Sequence accesion number, length (amino acids) and percentage similarity | |||||||
|---|---|---|---|---|---|---|---|---|
Organism | glnA1 | glnA2 | glnA3 | glnA4 | ||||
Acidothermus cellulolyticus 11B | YP_872682 | (474 aa) 72% | YP_872678 | (453 aa) 68% | YP_872678 | (453 aa) 30% | YP_873609 | (446 aa) 61% |
Arthrobacter sp. FB24 | YP_947504 | (474 aa) 63% | YP_947491 | (446 aa) 65% | YP_831086 | (446 aa) 29% | YP_831086 | (446 aa) 31% |
Bifidobacterium longum NCC2705 | NP_696248 | (478 aa) 62% | NP_696466 | (445 aa) 60% | NP_696466 | (445 aa) 27% | NP_696466 | (445 aa) 29% |
Brevibacterium linens BL2 | ZP_00378605 | (474 aa) 62% | ZP_00378066 | (452 aa) 62% | ZP_00378066 | (452 aa) 29% | ZP_00381218 | (454 aa) 56% |
Corynebacterium diphtheriae NCTC 13129 | NP_939986 | (478 aa) 67% | NP_940011 | (446 aa) 64% | NP_940011 | (446 aa) 25% | NP_940011 | (466 aa) 28% |
C. efficiens YS-314 | NP_738714 | (477 aa) 70% | NP_738737 | (516 aa) 66% | NP_738737 | (516 aa) 29% | NP_738737 | (516 aa) 29% |
C. glutamicum ATCC 13032 | YP_226455 | (477 aa) 70% | YP_226471 | (446 aa) 65% | YP_226471 | (446 aa) 29% | YP_226471 | (446 aa) 29% |
C. jeikeium K411 | YP_250482 | (500 aa) 71% | YP_250455 | (448 aa) 71% | YP_250455 | (448 aa) 29% | YP_250455 | (448 aa) 29% |
Frankia sp. EAN1pec | YP_001506114 | (474 aa) 66% | YP_001506110 | (452 aa) 65% | YP_001510745 | (496 aa) 38% | YP_001505022 | (470 aa) 56% |
Janibacter sp. HTCC2649 | ZP_00994949 | (474 aa) 66% | ZP_00995601 (445 aa) 70% | Â | ZP_00995688 (446 aa) 42% | Â | ZP_00997071 | (461 aa) 59% |
Kineococcus radiotolerans SRS30216 | YP_001363019 | (474 aa) 68% | YP_001363024 | (447 aa) 65% | YP_001363024 | (447 aa) 31% | YP_001361387 | (460 aa) 61% |
Leifsonia xyli subsp. xyli str. CTCB07 | YP_062980 | (474 aa) 62% | YP_061977 | (445 aa) 63% | YP_061977 | (445 aa) 28% | YP_061977 | (445 aa) 32% |
Mycobacterium avium 104 | YP_881471 | (478 aa) 90% | YP_881448 | (446 aa) 94% | YP_882016 | (450 aa) 80% | YP_882894 | (468 aa) 78% |
M. bovis AF2122/97 | NP_855893 | (478 aa) 100% | NP_855895 | (446 aa) 100% | NP_855562 | (450 aa) 100% | NP_856530 | (457 aa) 100% |
M. bovis BCG str. Pasteur 1173P2 | YP_978326 | (478 aa) 100% | YP_978328 | (446 aa) 100% | YP_978005 | (450 aa) 100% | YP_978966 | (475 aa) 100% |
M. leprae TN | NP_301707 | (478 aa) 91% | NP_302123 | (448 aa) 93% | NP_302123 | (448 aa) 27% | NP_302123 | (448 aa) 29% |
M. smegmatis str. MC2 155 | YP_888567 | (478 aa) 84% | YP_888571 | (446 aa) 88% | YP_887864 | (453 aa) 64% | YP_886932 | (457 aa) 74% |
M. sp. KMS | YP_939366 | (478 aa) 85% | YP_939374 | (446 aa) 89% | YP_936250 | (437 aa) 47% | YP_938091 | (455 aa) 74% |
M. tuberculosis CDC1551 | NP_336749 | (478 aa) 00% | NP_336751 | (446 aa) 100% | NP_336385 | (450 aa) 100% | NP_337439 | (457 aa) 100% |
M. tuberculosis F11 | ZP_01685137 | (478 aa) 100% | ZP_01685139 | (446 aa) 100% | ZP_01684789 | (450 aa) 100% | ZP_01685769 | (462 aa) 100% |
M. tuberculosis H37Rv | NP_216736 | (478 aa) 100% | NP_216738 | (446 aa) 100% | NP_216394 | (450 aa) 100% | NP_217376 | (457 aa) 100% |
M. ulcerans Agy99 | YP_905364 | (478 aa) 90% | YP_905360 | (446 aa) 93% | YP_905360 | (446 aa) 27% | YP_905360 | (446 aa) 30% |
M. gilvum PYR-GCK | YP_001134193 | (478 aa) 84% | YP_001134174 | (446 aa) 89% | YP_001134583 | (453 aa) 66% | YP_001135323 | (469 aa) 74% |
M. vanbaalenii PYR-1 | YP_954385 | (478 aa) 85% | YP_954396 | (446 aa) 88% | YP_953732 | (442 aa) 64% | YP_953098 | (459 aa) 72% |
Nocardia farcinica IFM 10152 | YP_117877 | (478 aa) 77% | YP_117870 | (446 aa) 83% | YP_117870 | (446 aa) 28% | YP_117870 | (446 aa) 31% |
Nocardioides sp. JS614 | YP_923487 | (474 aa) 71% | YP_923242 | (455 aa) 66% | YP_923242 | (455 aa) 28% | YP_923778 | (464 aa) 59% |
Propionibacterium acnes KPA171202 | YP_055385 | (473 aa) 66% | YP_055378 | (468 aa) 63% | YP_055378 | (468 aa) 30% | YP_055378 | (468 aa) 30% |
Rhodococcus sp. RHA1 | YP_701142 | (478 aa) 81% | YP_701152 | (446 aa) 84% | YP_701692 | (433 aa) 47% | YP_705251 | (451 aa) 33% |
Salinispora tropica CNB-440 | YP_001160144 | (474 aa) 70% | YP_001160151 | (451 aa) 68% | YP_001160151 | (451 aa) 29% | YP_001160151 | (451 aa) 30% |
Streptomyces avermitilis MA-4680 | NP_827182 | (469 aa) 70% | NP_827131 | (453 aa) 69% | NP_827131 | (453 aa) 29% | NP_827901 | (454 aa) 65% |
S. coelicolor A3(2) | NP_626450 | (469 aa) 71% | NP_626490 | (453 aa) 69% | NP_626490 | (453 aa) 28% | NP_625889 | (462 aa) 64% |
Symbiobacterium thermophilum IAM 14863 | YP_074027 | (471 aa) 50% | YP_074027 | (471 aa) 33% | YP_074027 | (471 aa) 28% | YP_074027 | (471 aa) 32% |
Thermobifida fusca YX | YP_289049 | (474 aa) 68% | YP_289043 | (453 aa) 68% | YP_289043 | (453 aa) 27% | YP_289043 | (453 aa) 28% |
Marine actinobacterium PHSC20C1 | ZP_01131573 | (478 aa) 64% | ZP_01129622 | (445 aa) 62% | ZP_01129567 | (416 aa) 27% | ZP_01129199 | (455 aa) 70% |