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Table 2 Haplotype and microsatellite diversity in pampas cat

From: Influence of ancient glacial periods on the Andean fauna: the case of the pampas cat (Leopardus colocolo)

       

Microsatellites

Locality

mtDNA (HVS-I)

Fca24

Fca31

Fca45

Fca96

Fca294

Total

 

n

H

hd

S

P

π × 100

k

He

k

He

k

He

k

He

k

He

k

1

3

1

0

0

0

0

2

0.73

3

0.60

3

0.73

2

0.33

2

0.60

12

2

19

5

0.59

9

2.64

0.96

6

0.49

5

0.69

9

0.74

6

0.58

9

0.78

35

3

19

6

0.81

9

2.64

0.95

4

0.57

6

0.68

8

0.80

9

0.93

7

0.81

34

4

12

5

0.83

13

3.82

1.46

6

0.64

6

0.75

4

0.70

5

0.59

4

0.70

25

5

8

5

0.86

13

3.82

1.25

4

0.65

8

0.84

5

0.63

5

0.68

6

0.77

28

6

6

5

0.93

9

2.64

1.41

3

0.59

6

0.80

5

0.77

5

0.74

5

0.68

24

7

1

1

0

0

0

0

2

1.00

1

0.00

2

1.00

1

0.00

2

1.00

8

8

19

8

0.91

42

12.3

2.6

4

0.56

6

0.75

6

0.74

7

0.76

8

0.87

31

9

12

8

0.92

24

7.06

2.26

4

0.42

5

0.74

6

0.72

7

0.76

7

0.85

29

10

2

1

0

0

0

0

2

0.50

3

0.84

3

0.84

2

0.67

3

0.84

13

11

15

7

0.88

58

17.06

5.2

5

0.62

7

0.71

3

0.45

5

0.74

5

0.36

25

12

3

2

0.67

11

3.23

2.17

4

0.87

4

0.80

2

0.33

3

0.73

3

0.60

16

13

2

1

0

0

0

0

2

0.50

3

0.84

2

0.50

3

0.84

1

0.00

11

14

28

14

0.9

67

19.7

5.18

7

0.68

7

0.67

8

0.70

8

0.86

7

0.35

37

15

30

14

0.8

66

19.41

4.59

7

0.69

12

0.67

9

0.73

8

0.81

12

0.82

48

16

5

4

0.9

38

11.2

4.76

5

0.89

3

0.61

2

0.25

3

0.55

4

0.79

17

17

7

4

0.81

22

6.47

3.25

4

0.74

6

0.86

4

0.75

6

0.74

5

0.79

25

18

5

2

0.6

8

2.35

1.4

3

0.69

5

0.82

4

0.76

4

0.53

4

0.78

20

19

3

2

0.67

3

0.88

0.59

3

0.73

2

0.33

4

0.87

5

0.93

3

0.73

17

Mean values

14.23

6.69

0.83

29.08

8.55

2.71

4.77

0.63

6.31

0.74

5.61

0.67

6

0.71

6.38

0.72

29.08

Total

199

41

0.94

94

27.65

6.09

10

0.79

21

0.89

15

0.88

14

0.83

14

0.79

74

  1. The locality numbers correspond to those on the Table 1. Mean values were calculated with the localities with more than 4 individuals only. Total values were calculated for the entire sample. n = sample size; H = number of haplotypes; hd = haplotype diversity; S = number of polymorphic sites; P = percentage of variable sites; π = nucleotid diversity; k = number of alleles; HE = expected heterozygosity.