Gene | JGI Gene Model | Baumann et al. 2008 | Scaffold | Position | Correction of Gene Prediction | Gene Product | EST Count |
---|---|---|---|---|---|---|---|
Clade a | |||||||
GFPa1 | fgenesh2_pg.scaffold_1000062 | Lan1 | 1 | 1116500–1118933 | None | EST/PCR | 204 |
GFPa2 | fgenesh2_pg.scaffold_264000004 | Lan3 | 264 | 58192–60413 | Trimmed N-term | EST | 27 |
GFPa3 | fgenesh2_pg.scaffold_549000016 | Lan9 | 549 | 352398–358639 | None | No |  |
GFPa4 | fgenesh2_pg.scaffold_549000017 |  | 549 | 364853–368343 | Trimmed C-term | No |  |
GFPa5 | fgenesh2_pg.scaffold_1000068 | Lan12 | 1 | 1208185–1211151 | Trimmed C-term | No |  |
Clade b | |||||||
GFPb1 | fgenesh2_pg.scaffold_408000038 | Lan13 | 408 | 704470–709647 | Trimmed N-term | No |  |
GFPb1a | fgenesh2_pg.scaffold_58000035 |  | 58 | 532019–534945 | Trimmed N-term (7AA + ATG) | No |  |
GFPb2 | fgenesh2_pg. scaffold_408000037 |  | 408 | 691033–694888 | Extended N, C term | No |  |
GFPb2a | fgenesh2_pg. scaffold_58000034 | Lan19 | 58 | 518572–521504 | Trimmed start (48AA) | No |  |
GFPb3 | estExt_fgenesh2_pg.C_4080036 | Lan5-Nterm | 408 | 656826–660682 | Extended N-term, trimmed C-term. | EST | 1 |
GFPb3a | fgenesh2_pg.scaffold_58000032 |  | 58 | 485880–488855 | Trimmmed N-term, added ATG | No |  |
GFPb4 | estExt_fgenesh2_pg.C_4080036 | Lan5-Cterm | 408 | 674499–680280 | Trimmed N-term. | EST | 1 |
GFPb4a | fgenesh2_pg.scaffold_58000033 |  | 58 | 507562–508283 | Two-exon fragment. Trimmed and extended both ends | No |  |
Clade c | |||||||
GFPc1 | fgenesh2_pg.scaffold_722000001 | Lan11 | 722 | 186–3347 | Trimmed N-term, added ATG | No |  |
GFPc1a | fgenesh2_pg.scaffold_58000036 |  | 58 | 555111–557942 | None | PCR |  |
Clade d | |||||||
GFPd1 | fgenesh2_pg.scaffold_149000048 |  | 150 | 209871–211956 | Trimmed N-term | EST/PCR | 13 |
GFPd1a | fgenesh2_pg.scaffold_150000025 |  | 149 | 908671–910787 | None | No |  |
GFPd2 | fgenesh2_pg.scaffold_771000005 |  | 771 | 43072–45512 | None | EST/PCR | 5 |
GFPd2a | estExt_fgenesh2_pg.C_2370020 | Lan7 | 237 | 340592–343047 | Trimmed N-term | No |  |
Clade e | |||||||
GFPe1 | fgenesh2_pg.scaffold_1000063 |  | 1 | 1141692–1143777 | Filled internal deletion | EST/PCR | 194 |
GFPe2 | fgenesh2_pg.scaffold_1000066 | Lan4 | 1 | 1168253–1170596 | None | EST | 26 |
GFPe2a | fgenesh2_pg.scaffold_13000140 |  | 13 | 3112741–3113363 | Extended N-term | No |  |
GFPe3 | fgenesh2_pg.scaffold_1000064 | Lan2 | 1 | 1150911–1152721 | None | EST | 125 |
GFPe3a | fgenesh2_pg.scaffold_264000003 |  | 264 | 31164–32864 | Extended C-term | No |  |
Clade f | |||||||
GFPf1 | fgenesh2_pg.scaffold_1000065 | Lan6 | 1 | 1159351–1162889 | None | EST | 3 |
GFPf1a | fgenesh2_pg.scaffold_264000002 |  | 264 | 14129–18055 | Trimmed internal insert | EST (truncated) |  |