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Table 2 Main features of the mitogenome of Ma. balthica

From: Mitochondrial genomes of the Baltic clam Macoma balthica(Bivalvia: Tellinidae): setting the stage for studying mito-nuclear incompatibilities

Gene

Position

Size

Intergenic nucleotides 1

Codon 2

 

From

To

Nucleotides

Amino acids

 

Start

Stop

tRNA-Met

1

65

65

 

9

  

atp8

75

203

129

42

3

ATT

TAA

tRNA-Ser1

207

275

69

 

10

  

nad6

286

819

534

177

−32

ATT

TAA

rrnL

788

2148

1361

 

25

  

atp6

2174

2884

711

236

121

ATG (GTG - F17)

TAA

cox3

3006

3818

813

270

60

GTG

TAA

nad2

3879

4889

1011

336

0

ATA

TAA

tRNA-Pro

4890

4955

66

 

13

  

tRNA-Gln

4969

5034

66

 

−1

  

tRNA-Cys

5034

5094

61

 

1

  

tRNA-Ala

5096

5161

66

 

0

  

tRNA-Phe

5162

5227

66

 

46

  

cox1

5274

6944

1671

556

0

ATA

TAA

nad4

6945

8285

1341

446

6

ATA

TAG

tRNA-His

8292

8356

65

 

1

  

tRNA-Ser2

8358

8422

65

 

1

  

tRNA-Glu

8424

8490

67

 

0

  

nad3

8491

8853

363

120

13

TTG

TAG (TAA - W20)

tRNA-Ile

8867

8935

69

 

2

  

tRNA-Lys

8938

9002

65

 

0

  

nad4l

9003

9293

291

96

5

GTG

TAA

tRNA-Tyr

9299

9360

62

 

0

  

tRNA-Thr

9361

9424

64

 

0

  

tRNA-Leu1

9425

9489

65

 

0

  

tRNA-Asp

9490

9553

64

 

1

  

tRNA-Leu2

9555

9620

66

 

1

  

nad1

9622

10545

924

307

1

ATG

TAG

tRNA-Asn

10547

10611

65

 

0

  

nad5

10612

12405

1794

597

−50

TTG

TAA

tRNA-Arg

12356

12420

65

 

1

  

cob

12422

13660

1239

412

1

ATT

TAA

cox2

13662

14516

855

284

3

ATG

TAA

tRNA-Val

14520

14586

67

 

0

  

tRNA-Trp

14587

14652

66

 

5

  

tRNA-Gly

14658

14723

66

 

3

  

rrnS

14727

15606

880

 

1200*

  
  1. Main features of the mitogenome of Ma. balthica, based on specimen A10.
  2. 1Nucleotide positions are indicated by the numbers separating the different mitochondrial genes. Overlapping nucleotides between adjacent genes are noticed by negative numbers.
  3. 2atp6 and nad3 genes presented specific codon for one mitogenome. Codon is indicated in brackets following by mtDNA reference.
  4. *See text.