Primer name | Primer sequence | Forward or reverse | Source |
---|---|---|---|
Cytochrome oxidase subunit 1 | |||
CO1 (LCO490) | 5’-GGT CAA CAA ATC ATA AAG ATA TTG G-3’ | Forward | Folmer et al., [27] |
CO2 (HCO2198) | 5’-TAA ACT TCA GGG TGA CCA AAA AAT CA-3’ | Reverse | |
Asmit 1 (ATI) | 5’-TTT TTT GGG CAT CCT GAG GTT TAT-3’ | Forward | Bowles et al., [28] |
Asmit 2 (AT2) | 5’-TAA AGA AAG AAC ATA ATG AAA ATG-3’ | Reverse | |
Internal transcribed spacer of the ribosomal gene complex | |||
ETTS1 | 5’- TGC TTA AGT TCA GCG GGT -3’ | Reverse | Kane and Rollinson, [29] |
ETTS2 | 5’- TAA CAA GGT TTC CGT AGG TGA A -3’ | Forward | |
Small Subunit rRNA (SSU) | |||
18SBaso3F | 5’-GTG CTC TTC NCT GAG GGT CC-3’ | Forward | Jørgensen et al., 2011 [8] |
18SBaso9R | 5’-TAC GGA AGC CTT GTT ACG A-3’ | Reverse | |
Large Subunit rRNA (LSU) | |||
Baso2600F | 5’-GGA ATC CGA CTG TCT AAT TAA AAC-3’ | Forward | Jørgensen et al., 2011 [8] |
Baso3600R | 5’-CRG ATG GAT GGT AGC YTC GCA CC-3’ | Reverse |