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Table 3 Inferred recombinant genotypes from analysis of the phased MH class IIα/IIβ PBR dataset

From: High intralocus variability and interlocus recombination promote immunological diversity in a minimal major histocompatibility system

Genotype

Recombination breakpoint

Mutation savings

p-val

DAA-E2*9/DAB-E2*4

198-4896

9

0.0001

DAA-E2*3/DAB-E2*13

180-4896

9

0.0002

DAA-E2*12/DAB-E2*14

188-4890

7

0.0002

DAA-E2*13/DAB-E2*13

198-4890

6

0.0001

DAA-E2*7/DAB-E2*2

210-5007

6

0.0016

DAA-E2*2/DAB-E2*6

5058-5079

6

0.0004

DAA-E2*9/DAB-E2*2

198-4896

6

0.0001

DAA-E2*2/DAB-E2*9

193-5007

5

0.0021

DAA-E2*2/DAB-E2*10

4930-5007

5

0.0001

DAA-E2*14/DAB-E2*2

180-4896

5

0.0053

  1. Note: Recombination breakpoints for interlocus recombinants include 4630 bp separating the sequenced peptide binding regions of MHIIα and IIβ (see Figure 1).
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BMC Ecology and Evolution

ISSN: 2730-7182

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