TY - JOUR AU - Anderson, D. M. AU - Alpermann, T. J. AU - Cembella, A. D. AU - Collos, Y. AU - Masseret, E. AU - Montresor, M. PY - 2012 DA - 2012// TI - The globally distributed genus Alexandrium: multifaceted roles in marine ecosystems and impacts on human health JO - Harmful Algae VL - 14 UR - https://doi.org/10.1016/j.hal.2011.10.012 DO - 10.1016/j.hal.2011.10.012 ID - Anderson2012 ER - TY - CHAP AU - Holmes, M. J. AU - Brust, A. AU - Lewis, R. J. ED - Botana, L. M. PY - 2014 DA - 2014// TI - Dinoflagellate Toxins: An overview BT - Seafood and Freshwater Toxins: Pharmacology, physiology and detection, Third edition PB - CRC Press CY - Boca Raton, FL ID - Holmes2014 ER - TY - STD TI - Kelly MG, Tett P: Bioluminescence in the ocean. In: Bioluminescence in action. Academic Press; 1978. ID - ref3 ER - TY - CHAP AU - Spector, D. L. ED - Spector, D. L. PY - 1984 DA - 1984// TI - Dinoflagellate Nuclei BT - Dinoflagellates PB - Academic Press CY - London UR - https://doi.org/10.1016/B978-0-12-656520-1.50008-0 DO - 10.1016/B978-0-12-656520-1.50008-0 ID - Spector1984 ER - TY - JOUR AU - Lin, S. PY - 2011 DA - 2011// TI - Genomic understanding of dinoflagellates. London JO - Res Microbiol VL - 162 UR - https://doi.org/10.1016/j.resmic.2011.04.006 DO - 10.1016/j.resmic.2011.04.006 ID - Lin2011 ER - TY - JOUR AU - Wisecaver, J. H. AU - Hackett, J. D. PY - 2011 DA - 2011// TI - Dinoflagellate genome evolution JO - Annu Rev Microbiol VL - 65 UR - https://doi.org/10.1146/annurev-micro-090110-102841 DO - 10.1146/annurev-micro-090110-102841 ID - Wisecaver2011 ER - TY - JOUR AU - Shoguchi, E. AU - Shinzato, C. AU - Kawashima, T. AU - Gyoja, F. AU - Mungpakdee, S. AU - Koyanagi, R. PY - 2013 DA - 2013// TI - Draft Assembly of the Symbiodinium minutum Nuclear Genome Reveals Dinoflagellate Gene Structure JO - Curr Biol VL - 23 UR - https://doi.org/10.1016/j.cub.2013.05.062 DO - 10.1016/j.cub.2013.05.062 ID - Shoguchi2013 ER - TY - JOUR AU - Bachvaroff, T. R. AU - Concepcion, G. T. AU - Rogers, C. R. AU - Delwiche, C. F. PY - 2004 DA - 2004// TI - Dinoflagellate EST data indicate massive transfer of chloroplast genes to the nucleus JO - Protist VL - 55 UR - https://doi.org/10.1078/1434461000165 DO - 10.1078/1434461000165 ID - Bachvaroff2004 ER - TY - JOUR AU - Bachvaroff, T. R. AU - Place, A. R. PY - 2008 DA - 2008// TI - From stop to start: tandem gene arrangement, copy number and trans-splicing sites in the dinoflagellate Amphidinium carterae JO - PLoS One VL - 3 UR - https://doi.org/10.1371/journal.pone.0002929 DO - 10.1371/journal.pone.0002929 ID - Bachvaroff2008 ER - TY - JOUR AU - Hiller, R. G. AU - Wrench, P. M. AU - Sharples, F. P. PY - 1995 DA - 1995// TI - The light harvesting chlorophyll a-c-binding protein of dinoflagellates: a putative polyprotein JO - FEBS Lett VL - 363 UR - https://doi.org/10.1016/0014-5793(95)00297-M DO - 10.1016/0014-5793(95)00297-M ID - Hiller1995 ER - TY - JOUR AU - Kim, S. AU - Bachvaroff, T. R. AU - Handy, S. M. AU - Delwiche, C. F. PY - 2011 DA - 2011// TI - Dynamics of actin evolution in dinoflagellates JO - Mol Biol Evol VL - 28 UR - https://doi.org/10.1093/molbev/msq332 DO - 10.1093/molbev/msq332 ID - Kim2011 ER - TY - JOUR AU - Reichman, J. AU - Wilcox, T. AU - Vize, P. PY - 2003 DA - 2003// TI - PCP Gene Family in Symbiodinium from Hippopus hippopus: Low level of concerted evolution, isoform diversity and spectral tuning of chromophores JO - Mol Biol Evol VL - 20 UR - https://doi.org/10.1093/molbev/msg233 DO - 10.1093/molbev/msg233 ID - Reichman2003 ER - TY - JOUR AU - Rowan, R. AU - Whitney, S. M. AU - Fowler, A. AU - Yellowlees, D. PY - 1996 DA - 1996// TI - Rubisco in marine symbiotic dinoflagellates: form II enzymes in eukaryotic oxygenic phototrophs encoded by a nuclear multigene family JO - Plant Cell VL - 8 UR - https://doi.org/10.1105/tpc.8.3.539 DO - 10.1105/tpc.8.3.539 ID - Rowan1996 ER - TY - JOUR AU - Zhang, H. AU - Hou, Y. AU - Lin, S. PY - 2006 DA - 2006// TI - Isolation and characterization of proliferating cell nuclear antigen from the dinoflagellate Pfeisteria piscicida JO - J Eukaryot Microbiol VL - 53 UR - https://doi.org/10.1111/j.1550-7408.2005.00085.x DO - 10.1111/j.1550-7408.2005.00085.x ID - Zhang2006 ER - TY - JOUR AU - Le, Q. H. AU - Markovic, P. AU - Hastings, J. W. AU - Jovine, R. V. AU - Morse, D. PY - 1997 DA - 1997// TI - Structure and organization of the peridinin-chlorophyll a-binding protein gene in Gonyaulax polyedra JO - Mol Gen Genet VL - 255 UR - https://doi.org/10.1007/s004380050533 DO - 10.1007/s004380050533 ID - Le1997 ER - TY - JOUR AU - Valiadi, M. AU - Iglesias-Rodriguez, M. D. AU - Amorim, A. PY - 2012 DA - 2012// TI - Distribution and genetic diversity of the luciferase gene within marine dinoflagellates JO - J Phycol VL - 48 UR - https://doi.org/10.1111/j.1529-8817.2012.01144.x DO - 10.1111/j.1529-8817.2012.01144.x ID - Valiadi2012 ER - TY - JOUR AU - Liu, L. AU - Hastings, J. PY - 2005 DA - 2005// TI - Novel and rapidly diverging intergenic sequences between tandem repeats of the luciferase genes in seven dinoflagellate species JO - J Phycol VL - 42 UR - https://doi.org/10.1111/j.1529-8817.2006.00165.x DO - 10.1111/j.1529-8817.2006.00165.x ID - Liu2005 ER - TY - JOUR AU - Liu, L. AU - Wilson, T. AU - Hastings, J. W. PY - 2004 DA - 2004// TI - Molecular evolution of dinoflagellate luciferases, enzymes with three catalytic domains in a single polypeptide JO - Proc Natl Acad Sci U S A VL - 101 UR - https://doi.org/10.1073/pnas.0407597101 DO - 10.1073/pnas.0407597101 ID - Liu2004 ER - TY - JOUR AU - Guillebault, D. AU - Sasorith, S. AU - Derelle, E. AU - Wurtz, J. M. AU - Lozano, J. C. AU - Bingham, S. PY - 2002 DA - 2002// TI - A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii JO - J Biol Chem VL - 277 UR - https://doi.org/10.1074/jbc.M205624200 DO - 10.1074/jbc.M205624200 ID - Guillebault2002 ER - TY - JOUR AU - Morse, D. AU - Milos, P. M. AU - Roux, E. AU - Hastings, J. W. PY - 1989 DA - 1989// TI - Circadian regulation of bioluminescence in Gonyaulax involves translational control JO - Proc Natl Acad Sci U S A VL - 86 UR - https://doi.org/10.1073/pnas.86.1.172 DO - 10.1073/pnas.86.1.172 ID - Morse1989 ER - TY - JOUR AU - Toulza, E. AU - Shin, M. S. AU - Blanc, G. AU - Audic, S. AU - Laabir, M. AU - Collos, Y. PY - 2010 DA - 2010// TI - Gene expression in proliferating cells of the dinoflagellate Alexandrium catenella (Dinophyceae) JO - Appl Environ Microbiol VL - 76 UR - https://doi.org/10.1128/AEM.02345-09 DO - 10.1128/AEM.02345-09 ID - Toulza2010 ER - TY - JOUR AU - Lidie, K. B. AU - Ryan, J. C. AU - Barbier, M. AU - Dolah, F. M. PY - 2005 DA - 2005// TI - Gene expression in Florida red tide dinoflagellate Karenia brevis: Analysis of an expressed sequence tag library and development of a DNA microarray JO - Mar Biotechnol (NY) VL - 7 UR - https://doi.org/10.1007/s10126-004-4110-6 DO - 10.1007/s10126-004-4110-6 ID - Lidie2005 ER - TY - JOUR AU - Morey, J. S. AU - Monroe, E. A. AU - Kinney, A. L. AU - Beal, M. AU - Johnson, J. G. AU - Hitchcock, G. L. PY - 2011 DA - 2011// TI - Transcriptomic response of the red tide dinoflagellate, Karenia brevis, to nitrogen and phosphorus depletion and addition JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-346 DO - 10.1186/1471-2164-12-346 ID - Morey2011 ER - TY - JOUR AU - Lowe, C. D. AU - Mello, L. V. AU - Samatar, N. AU - Martin, L. E. AU - Montagnes, D. J. AU - Watts, P. C. PY - 2011 DA - 2011// TI - The transcriptome of the novel dinoflagellate Oxyrrhis marina (Alveolata: Dinophyceae): response to salinity examined by 454 sequencing JO - BMC Genomics VL - 12 UR - https://doi.org/10.1186/1471-2164-12-519 DO - 10.1186/1471-2164-12-519 ID - Lowe2011 ER - TY - JOUR AU - Moustafa, A. AU - Evans, A. N. AU - Kulis, D. M. AU - Hackett, J. D. AU - Erdner, D. L. AU - Anderson, D. M. PY - 2010 DA - 2010// TI - Transcriptome profiling of a toxic dinoflagellate reveals a gene-rich protist and a potential impact on gene expression due to bacterial presence JO - PLoS One VL - 5 UR - https://doi.org/10.1371/journal.pone.0009688 DO - 10.1371/journal.pone.0009688 ID - Moustafa2010 ER - TY - JOUR AU - Yang, I. AU - John, U. AU - Beszteri, S. AU - Glockner, G. AU - Krock, B. AU - Goesmann, A. PY - 2010 DA - 2010// TI - Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum JO - BMC Genomics VL - 11 UR - https://doi.org/10.1186/1471-2164-11-248 DO - 10.1186/1471-2164-11-248 ID - Yang2010 ER - TY - JOUR AU - Roy, S. AU - Morse, D. PY - 2013 DA - 2013// TI - Transcription and maturation of mRNA in dinoflagellates JO - Microorganisms VL - 1 UR - https://doi.org/10.3390/microorganisms1010071 DO - 10.3390/microorganisms1010071 ID - Roy2013 ER - TY - JOUR AU - Lidie, K. B. AU - Dolah, F. M. PY - 2007 DA - 2007// TI - Spliced leader RNA-mediated trans-splicing in a dinoflagellate, Karenia brevis JO - J Eukaryot Microbiol VL - 54 UR - https://doi.org/10.1111/j.1550-7408.2007.00282.x DO - 10.1111/j.1550-7408.2007.00282.x ID - Lidie2007 ER - TY - JOUR AU - Zhang, J. AU - Hou, Y. AU - Miranda, L. AU - Campbell, D. AU - Sturm, N. AU - Gaasterland, T. PY - 2007 DA - 2007// TI - Spliced leader RNA trans-splicing in dinoflagellates JO - Proc Natl Acad Sci VL - 104 UR - https://doi.org/10.1073/pnas.0700258104 DO - 10.1073/pnas.0700258104 ID - Zhang2007 ER - TY - JOUR AU - Jagus, R. AU - Bachvaroff, T. R. AU - Joshi, B. AU - Place, A. R. PY - 2012 DA - 2012// TI - Diversity of Eukaryotic Translational Initiation Factor eIF4E in Protists JO - Comp Funct Genomics VL - 2012 ID - Jagus2012 ER - TY - JOUR AU - Marcotrigiano, J. AU - Gingras, A. C. AU - Sonenberg, N. AU - Burley, S. K. PY - 1997 DA - 1997// TI - Cocrystal structure of the messenger RNA 5′ cap-binding protein (eIF4E) bound to 7-methyl-GDP JO - Cell VL - 89 UR - https://doi.org/10.1016/S0092-8674(00)80280-9 DO - 10.1016/S0092-8674(00)80280-9 ID - Marcotrigiano1997 ER - TY - JOUR AU - Matsuo, H. AU - Li, H. AU - McGuire, A. M. AU - Fletcher, C. M. AU - Gingras, A. C. AU - Sonenberg, N. PY - 1997 DA - 1997// TI - Structure of translation factor eIF4E bound to m7GDP and interaction with 4E-binding protein JO - Nat Struct Biol VL - 4 UR - https://doi.org/10.1038/nsb0997-717 DO - 10.1038/nsb0997-717 ID - Matsuo1997 ER - TY - JOUR AU - Joshi, B. AU - Lee, K. AU - Maeder, D. L. AU - Jagus, R. PY - 2005 DA - 2005// TI - Phylogenetic analysis of eIF4E-family members JO - BMC Evol Biol VL - 5 UR - https://doi.org/10.1186/1471-2148-5-48 DO - 10.1186/1471-2148-5-48 ID - Joshi2005 ER - TY - JOUR AU - Kamenska, A. AU - Simpson, C. AU - Standart, N. PY - 2014 DA - 2014// TI - eIF4E-binding proteins: new factors, new locations, new roles JO - Biochem Soc Trans VL - 42 UR - https://doi.org/10.1042/BST20140063 DO - 10.1042/BST20140063 ID - Kamenska2014 ER - TY - JOUR AU - Hernandez, G. AU - Altmann, M. AU - Sierra, J. M. AU - Urlaub, H. AU - Diez del Corral, R. AU - Schwartz, P. PY - 2005 DA - 2005// TI - Functional analysis of seven genes encoding eight translation initiation factor 4E (eIF4E) isoforms in Drosophila JO - Mech Dev VL - 122 UR - https://doi.org/10.1016/j.mod.2004.11.011 DO - 10.1016/j.mod.2004.11.011 ID - Hernandez2005 ER - TY - JOUR AU - Aitken, C. E. AU - Lorsch, J. R. PY - 2012 DA - 2012// TI - A mechanistic overview of translation initiation in eukaryotes JO - Nat Struct Mol Biol VL - 19 UR - https://doi.org/10.1038/nsmb.2303 DO - 10.1038/nsmb.2303 ID - Aitken2012 ER - TY - JOUR AU - Hinnebusch, A. G. PY - 2012 DA - 2012// TI - Translational homeostasis via eIF4E and 4E-BP1 JO - Mol Cell VL - 46 UR - https://doi.org/10.1016/j.molcel.2012.06.001 DO - 10.1016/j.molcel.2012.06.001 ID - Hinnebusch2012 ER - TY - JOUR AU - Cho, P. F. AU - Poulin, F. AU - Cho-Park, Y. A. AU - Cho-Park, I. B. AU - Chicoine, J. D. AU - Lasko, P. PY - 2005 DA - 2005// TI - A new paradigm for translational control: inhibition via 5′-3′ mRNA tethering by Bicoid and the eIF4E cognate 4EHP JO - Cell VL - 121 UR - https://doi.org/10.1016/j.cell.2005.02.024 DO - 10.1016/j.cell.2005.02.024 ID - Cho2005 ER - TY - JOUR AU - Morita, M. AU - Ler, L. W. AU - Fabian, M. R. AU - Siddiqui, N. AU - Mullin, M. AU - Henderson, V. C. PY - 2012 DA - 2012// TI - A novel 4EHP-GIGYF2 translational repressor complex is essential for mammalian development JO - Mol Cell Biol VL - 32 UR - https://doi.org/10.1128/MCB.00455-12 DO - 10.1128/MCB.00455-12 ID - Morita2012 ER - TY - JOUR AU - Villaescusa, J. C. AU - Verrotti, A. C. AU - Ferretti, E. AU - Farookhi, R. AU - Blasi, F. PY - 2004 DA - 2004// TI - Expression of Hox cofactor genes during mouse ovarian follicular development and oocyte maturation JO - Gene VL - 330 UR - https://doi.org/10.1016/j.gene.2004.01.024 DO - 10.1016/j.gene.2004.01.024 ID - Villaescusa2004 ER - TY - JOUR AU - Hernandez, G. AU - Han, H. AU - Gandin, V. AU - Fabian, L. AU - Ferreira, T. AU - Zuberek, J. PY - 2012 DA - 2012// TI - Eukaryotic initiation factor 4E-3 is essential for meiotic chromosome segregation, cytokinesis and male fertility in Drosophila JO - Development VL - 139 UR - https://doi.org/10.1242/dev.073122 DO - 10.1242/dev.073122 ID - Hernandez2012 ER - TY - JOUR AU - Tettweiler, G. AU - Kowanda, M. AU - Lasko, P. AU - Sonenberg, N. AU - Hernandez, G. PY - 2012 DA - 2012// TI - The Distribution of eIF4E-Family Members across Insecta JO - Comp Funct Genomics VL - 2012 UR - https://doi.org/10.1155/2012/960420 DO - 10.1155/2012/960420 ID - Tettweiler2012 ER - TY - JOUR AU - Osborne, M. J. AU - Volpon, L. AU - Kornblatt, J. A. AU - Culjkovic-Kraljacic, B. AU - Baguet, A. AU - Borden, K. L. PY - 2013 DA - 2013// TI - eIF4E3 acts as a tumor suppressor by utilizing an atypical mode of methyl-7-guanosine cap recognition JO - Proc Natl Acad Sci U S A VL - 110 UR - https://doi.org/10.1073/pnas.1216862110 DO - 10.1073/pnas.1216862110 ID - Osborne2013 ER - TY - JOUR AU - Bachvaroff, T. R. AU - Gornik, S. G. AU - Concepcion, G. T. AU - Waller, R. F. AU - Mendez, G. S. AU - Lippmeier, J. C. PY - 2014 DA - 2014// TI - Dinoflagellate phylogeny revisited: Using ribosomal proteins to resolve deep branching dinoflagellate clades JO - Mol Phylogenet Evol VL - 70 UR - https://doi.org/10.1016/j.ympev.2013.10.007 DO - 10.1016/j.ympev.2013.10.007 ID - Bachvaroff2014 ER - TY - JOUR AU - Hoppenrath, M. AU - Leander, B. S. PY - 2010 DA - 2010// TI - Dinoflagellate phylogeny as inferred from heat shock protein 90 and ribosomal gene sequences JO - PLoS One VL - 5 UR - https://doi.org/10.1371/journal.pone.0013220 DO - 10.1371/journal.pone.0013220 ID - Hoppenrath2010 ER - TY - JOUR AU - Goggin, C. L. AU - Barker, S. C. PY - 1993 DA - 1993// TI - Phylogenetic position of the genus Perkinsus (Protista, Apicomplexa) based on small subunit ribosomal RNA JO - Mol Biochem Parasitol VL - 60 UR - https://doi.org/10.1016/0166-6851(93)90029-W DO - 10.1016/0166-6851(93)90029-W ID - Goggin1993 ER - TY - JOUR AU - Reece, K. S. AU - Siddall, M. E. AU - Burreson, E. M. AU - Graves, J. E. PY - 1997 DA - 1997// TI - Phylogenetic analysis of Perkinsus based on Actin Gene Sequences JO - J Parasitol VL - 83 UR - https://doi.org/10.2307/3284403 DO - 10.2307/3284403 ID - Reece1997 ER - TY - JOUR AU - Saldarriaga, J. F. AU - McEwan, M. L. AU - Fast, N. M. AU - Taylor, F. J. R. AU - Keeling, P. J. PY - 2003 DA - 2003// TI - Multiple protein phylogenies show that Oxyrrhis marina and Perkinsus marinus are early branches of the dinoflagellate lineage JO - IJSEM VL - 53 ID - Saldarriaga2003 ER - TY - JOUR AU - Gajadhar, A. A. AU - Marquardt, W. C. AU - Hall, R. AU - Gunderson, J. AU - Ariztia-Carmona, E. V. AU - Sogin, M. L. PY - 1991 DA - 1991// TI - Ribosomal RNA sequences of Sarcocystis muris, Theileria annulata and Crypthecodinium cohnii reveal evolutionary relationships among apicomplexans, dinoflagellates, and ciliates JO - Mol Biochem Parasitol VL - 45 UR - https://doi.org/10.1016/0166-6851(91)90036-6 DO - 10.1016/0166-6851(91)90036-6 ID - Gajadhar1991 ER - TY - JOUR AU - Baldauf, S. PY - 2003 DA - 2003// TI - The deep roots of eukaryotes JO - Science VL - 5626 UR - https://doi.org/10.1126/science.1085544 DO - 10.1126/science.1085544 ID - Baldauf2003 ER - TY - JOUR AU - Burki, F. AU - Shalchian-Tabrizi, K. AU - Minge, M. AU - Skjaevelenad, A. AU - Nikolaev, S. AU - Jakobsen, K. S. PY - 2007 DA - 2007// TI - Phylogenomics reshuffles the eukaryotic supergroups JO - PLoS One VL - 2 UR - https://doi.org/10.1371/journal.pone.0000790 DO - 10.1371/journal.pone.0000790 ID - Burki2007 ER - TY - JOUR AU - Bachvaroff, T. R. AU - Handy, S. M. AU - Place, A. R. AU - Delwiche, C. F. PY - 2011 DA - 2011// TI - Alveolate phylogeny inferred using concatenated ribosomal proteins JO - J Eukaryot Microbiol VL - 58 UR - https://doi.org/10.1111/j.1550-7408.2011.00555.x DO - 10.1111/j.1550-7408.2011.00555.x ID - Bachvaroff2011 ER - TY - JOUR AU - Guillou, L. AU - Viprey, M. AU - Chambouvet, A. AU - Welsh, R. M. AU - Kirkham, A. R. AU - Massana, R. PY - 2008 DA - 2008// TI - Widespread occurrence and genetic diversity of marine parasitoids belonging to Syndiniales (Alveolata) JO - Environ Microbiol VL - 10 UR - https://doi.org/10.1111/j.1462-2920.2008.01731.x DO - 10.1111/j.1462-2920.2008.01731.x ID - Guillou2008 ER - TY - JOUR AU - Coats, D. W. AU - Kim, S. AU - Bachvaroff, T. R. AU - Handy, S. M. AU - Delwiche, C. F. PY - 2010 DA - 2010// TI - Tintinnophagus acutus n.g., n. sp. (Phylum Dinoflagellata), an Ectoparasite of the Ciliate Tintinnopsis cylindrica Daday 1887, and Its Relationship to Duboscquodinium collini Grassse 1952 JO - J Eukaryot Microbiol VL - 57 UR - https://doi.org/10.1111/j.1550-7408.2010.00504.x DO - 10.1111/j.1550-7408.2010.00504.x ID - Coats2010 ER - TY - JOUR AU - Bachvaroff, T. R. AU - Handy, S. M. AU - Place, A. R. AU - Delwiche, C. F. PY - 2011 DA - 2011// TI - Alveolate phylogeny using ribosomal proteins JO - J Eukar Microbiol VL - 58 UR - https://doi.org/10.1111/j.1550-7408.2011.00555.x DO - 10.1111/j.1550-7408.2011.00555.x ID - Bachvaroff2011 ER - TY - JOUR AU - Tomoo, K. AU - Shen, X. AU - Okabe, K. AU - Nozoe, Y. AU - Fukuhara, S. AU - Morino, S. PY - 2003 DA - 2003// TI - Structural features of human initiation factor 4E, studied by X-ray crystal analyses and molecular dynamics simulations JO - J Mol Biol VL - 328 UR - https://doi.org/10.1016/S0022-2836(03)00314-0 DO - 10.1016/S0022-2836(03)00314-0 ID - Tomoo2003 ER - TY - JOUR AU - Mader, S. AU - Lee, H. AU - Pause, A. AU - Sonenberg, N. PY - 1995 DA - 1995// TI - The translation initiation factor eIF-4E binds to a common motif shared by the translation factor eIF-4 gamma and the translational repressors 4E-binding proteins JO - Mol Cell Biol VL - 15 ID - Mader1995 ER - TY - JOUR AU - Altmann, M. AU - Schmitz, N. AU - Berset, C. AU - Trachsel, H. PY - 1997 DA - 1997// TI - A novel inhibitor of cap-dependent translation initiation in yeast: p20 competes with eIF4G for binding to eIF4E JO - Embo J VL - 16 UR - https://doi.org/10.1093/emboj/16.5.1114 DO - 10.1093/emboj/16.5.1114 ID - Altmann1997 ER - TY - JOUR AU - Li, L. AU - Hong, R. AU - Hastings, J. PY - 1997 DA - 1997// TI - Three functional luciferase domains in a single polypeptide chain JO - Proc Natl Acad Sci VL - 94 UR - https://doi.org/10.1073/pnas.94.17.8954 DO - 10.1073/pnas.94.17.8954 ID - Li1997 ER - TY - JOUR AU - Lasko, P. PY - 2011 DA - 2011// TI - Posttranscriptional regulation in Drosophila oocytes and early embryos JO - Wiley Interdiscip Rev RNA VL - 2 UR - https://doi.org/10.1002/wrna.70 DO - 10.1002/wrna.70 ID - Lasko2011 ER - TY - JOUR AU - Lasda, E. L. AU - Blumenthal, T. PY - 2011 DA - 2011// TI - Trans-splicing JO - Wiley Interdiscip Rev RNA VL - 2 UR - https://doi.org/10.1002/wrna.71 DO - 10.1002/wrna.71 ID - Lasda2011 ER - TY - JOUR AU - Jankowska-Anyszka, M. AU - Lamphear, B. J. AU - Aamodt, E. J. AU - Harrington, T. AU - Darzynkiewicz, E. AU - Stolarski, R. PY - 1998 DA - 1998// TI - Multiple isoforms of eukaryotic protein synthesis initiation factor 4E in Caenorhabditis elegans can distinguish between mono- and trimethylated mRNA cap structures JO - J Biol Chem VL - 273 UR - https://doi.org/10.1074/jbc.273.17.10538 DO - 10.1074/jbc.273.17.10538 ID - Jankowska-Anyszka1998 ER - TY - JOUR AU - Keiper, B. D. AU - Lamphear, B. J. AU - Deshpande, A. M. AU - Jankowska-Anyszka, M. AU - Aamodt, E. J. AU - Blumenthal, T. PY - 2000 DA - 2000// TI - Functional characterization of five eIF4E isoforms in Caenorhabditis elegans JO - J Biol Chem VL - 275 UR - https://doi.org/10.1074/jbc.275.14.10590 DO - 10.1074/jbc.275.14.10590 ID - Keiper2000 ER - TY - JOUR AU - Dinkova, T. D. AU - Keiper, B. D. AU - Korneeva, N. L. AU - Aamodt, E. J. AU - Rhoads, R. E. PY - 2005 DA - 2005// TI - Translation of a small subset of Caenorhabditis elegans mRNAs is dependent on a specific eukaryotic translation initiation factor 4E isoform JO - Mol Cell Biol VL - 25 UR - https://doi.org/10.1128/MCB.25.1.100-113.2005 DO - 10.1128/MCB.25.1.100-113.2005 ID - Dinkova2005 ER - TY - JOUR AU - Zhang, H. AU - Campbell, D. A. AU - Sturm, N. R. AU - Lin, S. PY - 2009 DA - 2009// TI - Dinoflagellate spliced leader RNA genes display a variety of sequences and genomic arrangements JO - Mol Biol Evol VL - 26 UR - https://doi.org/10.1093/molbev/msp083 DO - 10.1093/molbev/msp083 ID - Zhang2009 ER - TY - JOUR AU - Hearne, J. L. AU - Pitula, J. S. PY - 2011 DA - 2011// TI - Identification of two spliced leader RNA transcripts from Perkinsus marinus JO - J Eukaryot Microbiol VL - 58 UR - https://doi.org/10.1111/j.1550-7408.2011.00538.x DO - 10.1111/j.1550-7408.2011.00538.x ID - Hearne2011 ER - TY - JOUR AU - Zhang, S. AU - Sui, Z. AU - Chang, L. AU - Kang, K. AU - Ma, J. AU - Kong, F. PY - 2014 DA - 2014// TI - Transcriptome de novo assembly sequencing and analysis of the toxic dinoflagellate Alexandrium catenella using the Illumina platform JO - Gene VL - 537 UR - https://doi.org/10.1016/j.gene.2013.12.041 DO - 10.1016/j.gene.2013.12.041 ID - Zhang2014 ER - TY - JOUR AU - Hernandez, G. AU - Vazquez-Pianzola, P. PY - 2005 DA - 2005// TI - Functional diversity of the eukaryotic translation initiation factors belonging to eIF4 families JO - Mech Dev VL - 122 UR - https://doi.org/10.1016/j.mod.2005.04.002 DO - 10.1016/j.mod.2005.04.002 ID - Hernandez2005 ER - TY - JOUR AU - Freire, E. R. AU - Malvezzi, A. M. AU - Vashisht, A. A. AU - Zuberek, J. AU - Saada, E. A. AU - Langousis, G. PY - 2014 DA - 2014// TI - Trypanosoma brucei Translation Initiation Factor Homolog EIF4E6 Forms a Tripartite Cytosolic Complex with EIF4G5 and a Capping Enzyme Homolog JO - Eukaryot Cell VL - 13 UR - https://doi.org/10.1128/EC.00071-14 DO - 10.1128/EC.00071-14 ID - Freire2014 ER - TY - JOUR AU - Freire, E. R. AU - Vashisht, A. A. AU - Malvezzi, A. M. AU - Zuberek, J. AU - Langousis, G. AU - Saada, E. A. PY - 2014 DA - 2014// TI - eIF4F-like complexes formed by cap-binding homolog TbEIF4E5 with TbEIF4G1 or TbEIF4G2 are implicated in post-transcriptional regulation in Trypanosoma brucei JO - RNA VL - 20 UR - https://doi.org/10.1261/rna.045534.114 DO - 10.1261/rna.045534.114 ID - Freire2014 ER - TY - JOUR AU - Volpon, L. AU - Osborne, M. J. AU - Culjkovic-Kraljacic, B. AU - Borden, K. L. PY - 2013 DA - 2013// TI - eIF4E3, a new actor in mRNA metabolism and tumor suppression JO - Cell Cycle VL - 12 UR - https://doi.org/10.4161/cc.24566 DO - 10.4161/cc.24566 ID - Volpon2013 ER - TY - JOUR AU - Grabherr, M. G. AU - Haas, B. J. AU - Yassour, M. AU - Levin, J. Z. AU - Thompson, D. A. AU - Amit, I. PY - 2011 DA - 2011// TI - Full-length transcriptome assembly from RNA-Seq data without a reference genome JO - Nat Biotechnol VL - 29 UR - https://doi.org/10.1038/nbt.1883 DO - 10.1038/nbt.1883 ID - Grabherr2011 ER - TY - JOUR AU - Park, M. G. AU - Cooney, S. K. AU - Yih, W. AU - Coats, D. W. PY - 2002 DA - 2002// TI - Effects of two strains of the parasitic dinoflagellate Amoebophrya on growth, photosynthesis, light absorption, and quantum yield of bloom-forming dinoflagellates JO - Mar Ecol Prog Ser VL - 227 UR - https://doi.org/10.3354/meps227281 DO - 10.3354/meps227281 ID - Park2002 ER - TY - JOUR AU - Bachvaroff, T. R. AU - Place, A. R. AU - Coats, D. W. PY - 2009 DA - 2009// TI - Expressed Sequence Tags from Amoebophrya sp. Infecting Karlodinium veneficum: Comparing Host and Parasite Sequences JO - J Eukar Microbiol VL - 56 UR - https://doi.org/10.1111/j.1550-7408.2009.00433.x DO - 10.1111/j.1550-7408.2009.00433.x ID - Bachvaroff2009 ER - TY - JOUR AU - Sievers, F. AU - Wilm, A. AU - Dineen, D. AU - Gibson, T. J. AU - Karplus, K. AU - Li, W. PY - 2011 DA - 2011// TI - Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega JO - Mol Syst Biol VL - 7 UR - https://doi.org/10.1038/msb.2011.75 DO - 10.1038/msb.2011.75 ID - Sievers2011 ER - TY - JOUR AU - Langmead, B. AU - Trapnell, C. AU - Pop, M. AU - Salzberg, S. L. PY - 2009 DA - 2009// TI - Ultrafast and memory-efficient alignment of short DNA sequences to the human genome JO - Genome Biol VL - 10 UR - https://doi.org/10.1186/gb-2009-10-3-r25 DO - 10.1186/gb-2009-10-3-r25 ID - Langmead2009 ER - TY - JOUR AU - Thorvaldsdottir, H. AU - Robinson, J. T. AU - Mesirov, J. P. PY - 2013 DA - 2013// TI - Integrative Genomics Viewer (IGV): high-performance genomics data visualization and exploration JO - Brief Bioinform VL - 14 UR - https://doi.org/10.1093/bib/bbs017 DO - 10.1093/bib/bbs017 ID - Thorvaldsdottir2013 ER - TY - JOUR AU - Stamatakis, A. PY - 2006 DA - 2006// TI - RAxML-VI-HPC: Maximum likelihood-based phylogenetic analysis with thousands of taxa and mixed models JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl446 DO - 10.1093/bioinformatics/btl446 ID - Stamatakis2006 ER - TY - JOUR AU - Schmidt, H. A. AU - Strimmer, K. AU - Vingron, M. AU - Haeseler, A. PY - 2002 DA - 2002// TI - TREE-PUZZLE: maximum liklihood phylogenetic analysis using quartets and parallel computing JO - Bioinformatics VL - 18 UR - https://doi.org/10.1093/bioinformatics/18.3.502 DO - 10.1093/bioinformatics/18.3.502 ID - Schmidt2002 ER - TY - JOUR AU - Vacic, V. AU - Uversky, V. N. AU - Dunker, A. K. AU - Lonardi, S. PY - 2007 DA - 2007// TI - Composition Profiler: a tool for discovery and visualization of amino acid composition differences JO - BMC Bioinformatics VL - 8 UR - https://doi.org/10.1186/1471-2105-8-211 DO - 10.1186/1471-2105-8-211 ID - Vacic2007 ER - TY - JOUR AU - Crooks, G. E. AU - Hon, G. AU - Chandonia, J. M. AU - Brenner, S. E. PY - 2004 DA - 2004// TI - WebLogo: A sequence logo generator JO - Genome Res VL - 14 UR - https://doi.org/10.1101/gr.849004 DO - 10.1101/gr.849004 ID - Crooks2004 ER - TY - JOUR AU - Kelley, L. A. AU - Sternberg, M. J. PY - 2009 DA - 2009// TI - Protein structure prediction on the Web: a case study using the Phyre server JO - Nat Protoc VL - 4 UR - https://doi.org/10.1038/nprot.2009.2 DO - 10.1038/nprot.2009.2 ID - Kelley2009 ER - TY - JOUR AU - Humphrey, W. AU - Dalke, A. AU - Schulten, K. PY - 1996 DA - 1996// TI - VMD: visual molecular dynamics JO - J Mol Graph VL - 14 UR - https://doi.org/10.1016/0263-7855(96)00018-5 DO - 10.1016/0263-7855(96)00018-5 ID - Humphrey1996 ER -