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Table 1 Summary statistics for the anchored-enriched (AHE) loci and transcriptome mining (TM) exons at different taxonomic levels and excluding non-informative loci

From: Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus group scincid lizards

    Locus length PICs % identity
  N samples N loci Max Min Mean Max Min Mean Max Min Mean
Anchored-enriched (AHE)            
All samples 44 415 1458 250 534 152 6 52.1 99.6 92.1 96.5
Carlia 1 5 264 1458 250 541 36 1 2.3 99.0 94.1 99.0
C. rubrigularis 1 4 253 1458 250 540 36 1 2.2 99.9 94.5 99.4
Lampropholis 13 414 1458 250 534 44 1 15.0 99.7 95.0 98.0
La. coggeri 1 6 314 1458 250 543 13 1 3.1 99.9 97.8 99.4
Niveoscincus 1 5 207 1458 250 538 8 1 1.6 99.7 96.7 98.9
Saproscincus 9 412 1458 250 535 45 1 6.7 99.9 90.1 98.4
S. basiliscus 1 5 221 1458 250 555 13 1 2.1 99.9 95.6 99.5
Transcriptome mining (TM)            
All taxa 11 1650 3249 101 337 132 1 19.2 99.7 90.1 96.3
TM data pruned to number of AHE loci (highest PICs)            
All taxa 11 415 3249 163 617 152 23 41.3 99.1 95.3 90.1
TM data pruned to number of AHE loci (randomly sampled)            
All taxa 11 415 2480 103 337 120 1 19.2 99.6 90.8 96.3
AHE data pruned to TM taxon sampling            
All taxa 11 415 1458 250 534 96 1 25.4 99.7 91.8 96.3
  1. 1Phylogenetic analyses were not performed on these data sets.