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Table 1 Summary polymorphism statistics for MHC class II-DAB and microsatellite markers

From: Selection on MHC class II supertypes in the New Zealand endemic Hochstetter’s frog

 

DAB beta 1 domain

Microsatellites

Population

N

A

95% CI N A

A R

H O

H E

Hd

S

π

k

N

Polymorphic Markers (/9)

A

95% CI N A

A R

H O

H E

Brynderwyn Range

18

14

(13–23)

14

0.389

0.900

0.925

57

0.0928

20.04

19

9

2.33 (2–4)

(2.11-3.00)

2.33

0.327

0.361

Northern Coromandel

41

29

(28–42)

18.7

0.268

0.918

0.929

63

0.0878

18.96

59

9

2.78 (2–5)

(2.89-3.56)

2.28

0.141

0.195

Central Coromandel

22

21

(16–27)

19.6

0.364

0.941

0.963

55

0.0861

18.6

29

7

2.67 (1–5)

(2.44-3.33)

2.49

0.203

0.221

Southern Coromandel

21

11

(16–26)

10.4

0.238

0.773

0.767

56

0.0804

17.36

35

6

1.89 (1–3)

(2.56-3.33)

1.72

0.073

0.116

Otawa

19

2

(14–24)

2

0.105

0.100

0.102

23

0.0108

2.36

26

1

1.11 (1–2)

(2.33-3.22)

1.11

0.073

0.054

Total Data Estimates

121

74

 

23.9

0.273

0.726

0.958

76

0.0906

19.58

168

6.4

3.78

 

2.63

0.164

0.189

  1. Number of individuals, N; average number of alleles per locus, A; 95% confidence interval for expected number of alleles for given sample size, 95% CI N A ; allelic richness, A R ; observed heterozygosity, H O , and expected heterozygosity, H E ; haplotype (gene) diversity, Hd; number of polymorphic (segregating) sites, S; nucleotide diversity, π; average number of nucleotide differences, k, and polymorphic markers describing the number of microsatellite markers that displayed polymorphism per population.