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Fig. 1 | BMC Evolutionary Biology

Fig. 1

From: Molecular phylogeny of Squaliformes and first occurrence of bioluminescence in sharks

Fig. 1

Maximum likelihood phylogenetic estimate of squalomorph sharks based on gene capture data of 172 nucleotide loci under a GTR + Gamma model using RAxML [35] partitioned into two sets, 1st and 2nd codon position as well as 3rd codon only. Analyzed specimens are listed in Additional file 1: Table S1. Nodes marked with black dots indicate 100 % bootstrap support and a posterior probability of 1 assessed in the Bayesian inference from the Phylobayes 3 analysis applying the CAT model [36, 37, 64]. Tree rooted midpoint, no outgroup defined.

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