From: Cross-validation to select Bayesian hierarchical models in phylogenetics
Method | Data set | SC + CSC | SC + EGC | UCLN + CSC | UCLN + EGC |
---|---|---|---|---|---|
Cross validation (50 % training; 50 % test) | EV-A71 | −1129.4(±3.1) | −1122.3(±2.0) | −1921.9(±9.8) | −1396.1(±12.0) |
WNV | −8216.7(±1.3) | −8213.1(±2.5) | −8648.9(±5.3) | −8691.3(±5.0) | |
RHDV | −6456.1(±0.6) | −6908.8(±0.3) | −6102.8(±1.3) | −6101.9(±1.6) | |
Shigella sonnei | −7698.8(±0.4) | −7699.5(±0.3) | −25997.4(±7.9) | −25630.9(±6.3) | |
Cross validation (80 % training; 20 % test) | EV-A71 | −443.0(±1.8) | −440.8(±1.0) | −1246.5(±4.7) | −1286.7(±14.8) |
WNV | −3615.2(±2.6) | −3614.9(±2.5) | −3900.0(±19.9) | −3857.1(±19.2) | |
RHDV | −2394.7(±0.6) | −2393.5(±0.7) | −2336.7(±1.0) | −2279.2(±0.8) | |
Shigella sonnei | −2978.2(±1.9) | −2979.8(±2.0) | −3172.3(±11.6) | −3032.5(±10.0) | |
Marginal likelihoods using stepping stone | EV-A71 | −2017.0 | −2014.7 | −2017.9 | −2078.6 |
WNV | −18012.7 | −17998.2 | −18009.2 | −17991.4 | |
RHDV | −11323.8 | −11292.6 | −11271.5 | −11245.8 | |
Shigella sonnei | −14739.6 | −14746.5 | −14717.8 | −14717.8 |