Skip to main content

Advertisement

Springer Nature is making SARS-CoV-2 and COVID-19 research free. View research | View latest news | Sign up for updates

Table 1 Summary of chloroplast genome statistics for Nemaliales and outgroups (Palmariaceae, Rhodothamniellaceae, Acrochaetiaceae). All specimen vouchers are deposited at MELU herbarium

From: Chloroplast genomes as a tool to resolve red algal phylogenies: a case study in the Nemaliales

Family Species Acession # Specimen ID Origin Genome size (BP) GC% Protein coding genes ORFs tRNA tmRNA rRNA ncRNA introns
Scinaiaceae Nothogenia fastigiata SAMEA4358435 J.0141 Chile 182 457 33.0 193 8 30 1 3 1 2
Scinaia undulata SAMEA4478602 J.0081 Chile 183 795 35.9 197 9 31 1 3 1 2
Galaxauraceae Actinotrichia fragilis SAMEA4357171 HV04073 Philippines 183 324 29.8 197 9 31 1 3 1 2
Galaxaura rugosa SAMEA4357173 JFC0074 Australia 181 215 29.6 197 7 31 1 3 1 2
Tricleocarpa cylindrica SAMEA4478608 J.0145 Costa Rica ≥150 119 - ≥149 ≥8 ≥25 ≥1 ≥1 ≥1 ≥0
Dichotomaria marginata SAMEA4357172 HV04060 Philippines 184 395 28.8 197 11 31 1 3 1 2
Liagoraceae Liagora brachyclada SAMEA4395348 J.0126 Chile 182 937 33.7 195 9 31 1 3 1 2
Liagora harveyana SAMEA4358432 J.0237 Chile 182 933 33.9 195 10 31 1 3 1 2
Izziella formosana SAMEA4358392 J.0158 Costa Rica 183 248 35.0 195 9 31 1 3 1 2
Neoizziella asiatica SAMEA4358434 J.0154 Costa Rica 183 313 33.4 195 10 31 1 3 1 2
Titanophycus setchellii SAMEA4478603 J.0604 Japan ≥183 356 - 195 ≥9 ≥31 ≥1 ≥3 ≥1 ≥2
Helminthora furcellata SAMEA4393237 J.0165 South Africa 184 585 32.1 195 8 31 1 3 1 2
Trichogloeopsis pedicellata SAMEA4358437 C.0024 French West Indies 183 497 31.9 194 8 31 1 3 1 2
Hommersandiophycus borowitzkae SAMEA4358391 HV00480 Jamaica 184 728 32.2 194 9 31 1 3 1 2
Dermonema virens SAMEA4357169 J.0258 Taiwan 184 997 34.1 195 9 31 1 3 1 2
Helminthocladia australis SAMEA4358292 J.0167 South Africa 185 694 32.8 195 9 31 1 3 1 2
Yamadallaceae Yamadaella caenomyce SAMEA4358436 J.0255 Chile 182 460 35.9 194 9 31 1 3 1 2
Liagoropsidaceae Liagoropsis maxima SAMEA4358433 J.0256 Taiwan 189 564 32.1 195 11 31 1 3 1 2
Nemaliaceae Nemalion sp. SAMEA4478604 H.1444 Italy 182 930 35.5 194 7 31 1 3 1 2
Palmariaceae Palmaria palmata SAMEA4478605 ODC1024 France ≥187 103 - ≥196 ≥11 ≥31 ≥1 ≥3 ≥1 ≥2
Rhodothamniellaceae Rhodothamniella floridula SAMEA4478606 HEC15602 France ≥182 494 - ≥196 ≥9 ≥29 ≥1 ≥1 ≥1 ≥2
Acrochaetiaceae Acrochaetium secundatum SAMEA4393238 FS1067 Bulgaria ≥183541 - ≥196 ≥12 ≥29 ≥1 ≥0 ≥1 ≥2