Multi-locus sequence data illuminate demographic drivers of Pleistocene speciation in semi-arid southern Australian birds (Cinclosoma spp.)

Table 2 Genetic diversity and divergence statistics

	C. clarum				C. castanotum				Divergence
Locus Name	Number of alleles	Number of distinct haplotypes	Hd	Pi	Number of alleles	Number of distinct haplotypes	Hd	Pi	Da
Mame-AL06	36	7	0.478	0.00173	12	3	0.318	0.00077	0.00185
Mame-AL08	36	4	0.383	0.00133	14	3	0.703	0.00285	0.00512
α-Globin2	42	6	0.509	0.00182	14	3	0.538	0.00335	0.00011
GAPD	42	8	0.663	0.00804	14	2	0.363	0.00169	0.00348
GTP	42	11	0.697	0.00424	14	5	0.505	0.00279	0.00055
12884	36	2	0.322	0.0007	14	2	0.143	0.00031	0.00007
15506	38	9	0.585	0.00094	6	4	0.800	0.00195	0.00006
20454	18	2	0.294	0.0009	14	4	0.758	0.00339	0.00208
26698	30	5	0.361	0.00117	8	2	0.250	0.00050	0.00002
16751	14	5	0.605	0.00299	14	3	0.385	0.00174	0.00385
23989	14	7	0.516	0.00211	14	2	0.363	0.00121	0.00006
ND2	22	17	0.97	0.00566	7	7	1	0.00729	0.04316

Number of alleles, number of distinct haplotypes, haplotype diversity (Hd), and nucleotide diversity (Pi), for each locus for i) C. clarum and ii) C. castanotum; and net divergence (Da), between C. clarum (including two specimens with putative C. clarum fordianum according to mtDNA) and C. castanotum for each locus

ISSN: 2730-7182