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Table 2 Maximum parsimony statistics from the analyses of the separate and combined data sets

From: Diversification into novel habitats in the Africa clade of Dioscorea (Dioscoreaceae): erect habit and elephant’s foot tubers

 

rbcLa

matK

trnL-F

trnH-psbA

psaA-ycf3

rpl32-trnL

Combined

No. of taxa

49

49

47

47

47

47

49

No. of included characters

(= aligned length)

529

729

738

409

709

1029

4143

No. of constant characters

472

526

613

361

602

770

3344

No. of variable sites

57

203

125

48

107

259

799

(10.77 %)

(27.85 %)

(16.94 %)

(11.74 %)

(15.09 %)

(25.17 %)

(19.29 %)

No. of parsimony informative character (PIC)

32

88

47

16

48

103

334

(6.05 %)

(12.07 %)

(6.37 %)

(3.91 %)

(6.77 %)

(10.01 %)

(8.07 %)

Contribution to total number of PIC

9.58 %

26.35 %

14.07 %

4.79 %

14.37 %

30.84 %

100 %

No. of most parsimonious trees

1

6154

7520

10000

3300

9960

72

Tree Length

77

275

163

59

153

340

1102

CI

0.81

0.84

0.84

0.92

0.8

0.86

0.82

RI

0.87

0.87

0.85

0.91

0.86

0.88

0.85

Average number of changes per variable site (number of steps/number of variable sites)

1.35

1.35

1.3

1.23

1.43

1.31

1.38