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Table 1 Pfam domains enriched in the root transcriptome

From: Genetic mechanisms of bone digestion and nutrient absorption in the bone-eating worm Osedax japonicus inferred from transcriptome and gene expression analyses

Pfam ID Domain description Total Root P.value Q.value
PF00413.19 Matrixin 62 26 5.96E-22 8.10E-20
PF00045.14 Hemopexin 40 20 4.45E-19 3.02E-17
PF01471.13 Putative peptidoglycan binding domain 31 14 5.95E-13 2.69E-11
PF05649.8 Peptidase family M13 34 12 8.85E-10 3.01E-08
PF13520.1 Amino acid permease 21 7 4.94E-06 1.12E-04
PF07690.11 Major Facilitator Superfamily 123 16 6.63E-06 1.29E-04
PF00939.14 Sodium:sulfate symporter transmembrane region 10 5 1.17E-05 1.76E-04
PF03600.11 Citrate transporter 10 5 1.17E-05 1.76E-04
PF00324.16 Amino acid permease 24 7 1.34E-05 1.82E-04
PF00246.19 Zinc carboxypeptidase 27 7 3.14E-05 3.88E-04
PF07953.7 Clostridium neurotoxin, N-terminal receptor binding 7 4 4.93E-05 5.15E-04
PF12388.3 Dual-action HEIGH metallo-peptidase 7 4 4.93E-05 5.15E-04
PF14670.1 Coagulation Factor Xa inhibitory site 68 10 1.27E-05 1.23E-03
PF01433.15 Peptidase family M1 24 6 1.47E-04 1.33E-03
PF14653.1 Insulin growth factor-like family 16 5 1.70E-04 1.44E-03
PF01431.16 Peptidase family M13 36 7 2.24E-04 1.79E-03
PF02244.11 Carboxypeptidase activation peptide 6 3 8.07E-04 5.77E-03
PF00431.15 CUB domain 46 7 1.06E-03 7.20E-03
PF05572.8 Pregnancy-associated plasma protein-A 7 3 1.37E-03 8.90E-03
PF01607.19 Chitin binding Peritrophin-A domain 63 8 1.60E-03 9.88E-03
PF13582.1 Metallo-peptidase family M12B Reprolysin-like 27 5 2.27E-03 1.29E-02
PF00664.18 ABC transporter transmembrane region 41 6 2.95E-03 1.53E-02
PF10462.4 Peptidase M66 9 3 3.13E-03 1.53E-02
PF00209.13 Sodium:neurotransmitter symporter family 32 5 4.91E-03 2.22E-02
PF13385.1 Concanavalin A-like lectin/glucanases superfamily 80 8 7.12E-03 2.93E-02
PF00005.22 ABC transporter 66 7 8.43E-03 3.37E-02
PF13688.1 Metallo-peptidase family M12 24 4 9.29E-03 3.58E-02
PF01391.13 Collagen triple helix repeat (20 copies) 39 5 1.15E-02 3.58E-02
PF03209.10 PUCC protein 5 2 1.16E-02 3.58E-02
PF04727.8 ELMO/CED-12 family 5 2 1.16E-02 3.58E-02
PF11669.3 WW domain-binding protein 1 5 2 1.16E-02 3.58E-02
PF13243.1 Prenyltransferase-like 5 2 1.16E-02 3.58E-02
PF11838.3 ERAP1-like C-terminal domain 14 3 1.19E-02 3.58E-02
PF00629.18 MAM domain 26 4 1.24E-02 3.58E-02
PF00012.15 Hsp70 protein 15 3 1.45E-02 4.10E-02
PF00083.19 Sugar (and other) transporter 43 5 1.71E-02 4.65E-02