TY - STD TI - Shiu SH, Bleecker AB. Receptor-like kinases from Arabidopsis form a monophyletic gene family related to animal receptor kinases. Proc Natl Acad Sci U S A. 2001;98(19):10763–10768. ID - ref1 ER - TY - JOUR AU - Gou, X. AU - He, K. AU - Yang, H. AU - Yuan, T. AU - Lin, H. AU - Clouse, S. D. AU - Li, J. PY - 2010 DA - 2010// TI - Genome-wide cloning and sequence analysis of leucine-rich repeat receptor-like protein kinase genes in Arabidopsis thaliana JO - BMC Genomics VL - 11 UR - https://doi.org/10.1186/1471-2164-11-19 DO - 10.1186/1471-2164-11-19 ID - Gou2010 ER - TY - JOUR AU - Bojar, D. AU - Martinez, J. AU - Santiago, J. AU - Rybin, V. AU - Bayliss, R. AU - Hothorn, M. PY - 2014 DA - 2014// TI - Crystal structures of the phosphorylated BRI1 kinase domain and implications for brassinosteroid signal initiation JO - Plant J VL - 78 UR - https://doi.org/10.1111/tpj.12445 DO - 10.1111/tpj.12445 ID - Bojar2014 ER - TY - JOUR AU - Hanks, S. K. AU - Quinn, A. M. AU - Hunter, T. PY - 1988 DA - 1988// TI - The protein kinase family: conserved features and deduced phylogeny of the catalytic domains JO - Science VL - 241 UR - https://doi.org/10.1126/science.3291115 DO - 10.1126/science.3291115 ID - Hanks1988 ER - TY - JOUR AU - Hanks, S. K. AU - Hunter, T. PY - 1995 DA - 1995// TI - Protein kinases 6. The eukaryotic protein kinase superfamily: kinase (catalytic) domain structure and classification JO - FASEB J VL - 9 ID - Hanks1995 ER - TY - JOUR AU - Clark, S. E. AU - Williams, R. W. AU - Meyerowitz, E. M. PY - 1997 DA - 1997// TI - The CLAVATA1 gene encodes a putative receptor kinase that controls shoot and floral meristem size in Arabidopsis JO - Cell VL - 89 UR - https://doi.org/10.1016/S0092-8674(00)80239-1 DO - 10.1016/S0092-8674(00)80239-1 ID - Clark1997 ER - TY - JOUR AU - Schoof, H. AU - Lenhard, M. AU - Haecker, A. AU - Mayer, K. F. AU - Jurgens, G. AU - Laux, T. PY - 2000 DA - 2000// TI - The stem cell population of Arabidopsis shoot meristems in maintained by a regulatory loop between the CLAVATA and WUSCHEL genes JO - Cell VL - 100 UR - https://doi.org/10.1016/S0092-8674(00)80700-X DO - 10.1016/S0092-8674(00)80700-X ID - Schoof2000 ER - TY - JOUR AU - Agusti, J. AU - Lichtenberger, R. AU - Schwarz, M. AU - Nehlin, L. AU - Greb, T. PY - 2011 DA - 2011// TI - Characterization of transcriptome remodeling during cambium formation identifies MOL1 and RUL1 as opposing regulators of secondary growth JO - PLoS Genet VL - 7 UR - https://doi.org/10.1371/journal.pgen.1001312 DO - 10.1371/journal.pgen.1001312 ID - Agusti2011 ER - TY - JOUR AU - Albrecht, C. AU - Russinova, E. AU - Hecht, V. AU - Baaijens, E. AU - Vries, S. PY - 2005 DA - 2005// TI - The Arabidopsis thaliana SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASES1 and 2 control male sporogenesis JO - Plant Cell VL - 17 UR - https://doi.org/10.1105/tpc.105.036814 DO - 10.1105/tpc.105.036814 ID - Albrecht2005 ER - TY - JOUR AU - Li, J. AU - Chory, J. PY - 1997 DA - 1997// TI - A putative leucine-rich repeat receptor kinase involved in brassinosteroid signal transduction JO - Cell VL - 90 UR - https://doi.org/10.1016/S0092-8674(00)80357-8 DO - 10.1016/S0092-8674(00)80357-8 ID - Li1997 ER - TY - JOUR AU - Gomez-Gomez, L. AU - Boller, T. PY - 2000 DA - 2000// TI - FLS2: an LRR receptor-like kinase involved in the perception of the bacterial elicitor flagellin in Arabidopsis JO - Mol Cell VL - 5 UR - https://doi.org/10.1016/S1097-2765(00)80265-8 DO - 10.1016/S1097-2765(00)80265-8 ID - Gomez-Gomez2000 ER - TY - JOUR AU - Zipfel, C. AU - Kunze, G. AU - Chinchilla, D. AU - Caniard, A. AU - Jones, J. D. G. AU - Boller, T. AU - Felix, G. PY - 2006 DA - 2006// TI - Perception of the bacterial PAMP EF-Tu by the receptor EFR restricts Agrobacterium-mediated transformation JO - Cell VL - 125 UR - https://doi.org/10.1016/j.cell.2006.03.037 DO - 10.1016/j.cell.2006.03.037 ID - Zipfel2006 ER - TY - JOUR AU - Fontes, E. P. B. AU - Santos, A. A. AU - Luz, D. F. AU - Waclawovsky, A. J. AU - Chory, J. PY - 2004 DA - 2004// TI - The geminivirus nuclear shuttle protein is a virulence factor that suppresses transmembrane receptor kinase activity JO - Genes Dev VL - 18 UR - https://doi.org/10.1101/gad.1245904 DO - 10.1101/gad.1245904 ID - Fontes2004 ER - TY - JOUR AU - Santos, A. A. AU - Lopes, K. V. G. AU - Apfata, J. A. C. AU - Fontes, E. P. B. PY - 2010 DA - 2010// TI - NSP-interacting kinase, NIK: a transducer of plant defence signalling JO - J Exp Bot VL - 61 UR - https://doi.org/10.1093/jxb/erq219 DO - 10.1093/jxb/erq219 ID - Santos2010 ER - TY - JOUR AU - Afzal, A. J. AU - Wood, A. J. AU - Lightfoot, D. A. PY - 2008 DA - 2008// TI - Plant receptor-like serine threonine kinases: Roles in signaling and plant defense JO - Mol Plant-Microbe Interact VL - 21 UR - https://doi.org/10.1094/MPMI-21-5-0507 DO - 10.1094/MPMI-21-5-0507 ID - Afzal2008 ER - TY - JOUR AU - Shiu, S. H. AU - Karlowski, W. M. AU - Pan, R. S. AU - Tzeng, Y. H. AU - Mayer, K. F. X. AU - Li, W. H. PY - 2004 DA - 2004// TI - Comparative analysis of the receptor-like kinase family in Arabidopsis and rice JO - Plant Cell VL - 16 UR - https://doi.org/10.1105/tpc.020834 DO - 10.1105/tpc.020834 ID - Shiu2004 ER - TY - JOUR AU - Sun, X. AU - Wang, G. -. L. PY - 2011 DA - 2011// TI - Genome-wide identification, characterization and phylogenetic analysis of the rice LRR-Kinases JO - PLoS One VL - 6 UR - https://doi.org/10.1371/journal.pone.0016079 DO - 10.1371/journal.pone.0016079 ID - Sun2011 ER - TY - JOUR AU - Zan, Y. AU - Ji, Y. AU - Zhang, Y. AU - Yang, S. AU - Song, Y. AU - Wang, J. PY - 2013 DA - 2013// TI - Genome-wide identification, characterization and expression analysis of populus leucine-rich repeat receptor-like protein kinase genes JO - BMC Genomics VL - 14 UR - https://doi.org/10.1186/1471-2164-14-318 DO - 10.1186/1471-2164-14-318 ID - Zan2013 ER - TY - JOUR AU - Wei, Z. AU - Wang, J. AU - Yang, S. AU - Song, Y. PY - 2015 DA - 2015// TI - Identification and expression analysis of the LRR-RLK gene family in tomato (Solanum lycopersicum) Heinz 1706 JO - Genome VL - 58 UR - https://doi.org/10.1139/gen-2015-0035 DO - 10.1139/gen-2015-0035 ID - Wei2015 ER - TY - JOUR AU - Rameneni, J. J. AU - Lee, Y. AU - Dhandapani, V. AU - Yu, X. AU - Choi, S. R. AU - Oh, M. -. H. AU - Lim, Y. P. PY - 2015 DA - 2015// TI - Genomic and Post-Translational modification analysis of leucine-rich-repeat receptor-like kinases in Brassica rapa JO - Plos One VL - 10 UR - https://doi.org/10.1371/journal.pone.0142255 DO - 10.1371/journal.pone.0142255 ID - Rameneni2015 ER - TY - STD TI - Zhou F, Guo Y, Qiu LJ. Genome-wide identification and evolutionary analysis of leucine-rich repeat receptor-like protein kinase genes in soybean. BMC Plant Biol. 2016;16:58. ID - ref21 ER - TY - STD TI - Magalhaes DM, Scholte LLS, Silva NV, Oliveira GC, Zipfel C, Takita MA, De Souza AA. LRR-RLK family from two Citrus species: genome-wide identification and evolutionary aspects. BMC Genomics. 2016;17:623. ID - ref22 ER - TY - JOUR AU - Fischer, I. AU - Dievart, A. AU - Droc, G. AU - Dufayard, J. F. AU - Chantret, N. PY - 2016 DA - 2016// TI - Evolutionary dynamics of the leucine-rich repeat receptor-like kinase (LRR-RLK) subfamily in angiosperms JO - Plant Physiol VL - 170 ID - Fischer2016 ER - TY - JOUR AU - Roy, S. W. AU - Gilbert, W. PY - 2006 DA - 2006// TI - The evolution of spliceosomal introns: patterns, puzzles and progress JO - Nat Rev Genet VL - 7 ID - Roy2006 ER - TY - JOUR AU - Karve, R. AU - Liu, W. AU - Willet, S. G. AU - Torii, K. U. AU - Shpak, E. D. PY - 2011 DA - 2011// TI - The presence of multiple introns is essential for ERECTA expression in Arabidopsis JO - RNA VL - 17 UR - https://doi.org/10.1261/rna.2825811 DO - 10.1261/rna.2825811 ID - Karve2011 ER - TY - JOUR AU - Wang, J. AU - Tan, S. AU - Zhang, L. AU - Li, P. AU - Tian, D. PY - 2011 DA - 2011// TI - Co-variation among major classes of LRR-encoding genes in two pairs of plant species JO - J Mol Evol VL - 72 UR - https://doi.org/10.1007/s00239-011-9448-1 DO - 10.1007/s00239-011-9448-1 ID - Wang2011 ER - TY - JOUR AU - Innan, H. AU - Kondrashov, F. PY - 2010 DA - 2010// TI - The evolution of gene duplications: classifying and distinguishing between models JO - Nat Rev Genet VL - 11 ID - Innan2010 ER - TY - CHAP AU - Zhang, J. ED - Long, M. ED - Gu, H. ED - Zhou, Z. PY - 2010 DA - 2010// TI - Positive Darwinian selection in gene evolution BT - Darwin’s heritage today: proceedings of the darwin 200 beijing international conference: 24–26 october 2009 PB - High Education Press CY - Beijing ID - Zhang2010 ER - TY - JOUR AU - Zhang, J. AU - Rosenberg, H. F. AU - Nei, M. PY - 1998 DA - 1998// TI - Positive Darwinian selection after gene duplication in primate ribonuclease genes JO - Proc Natl Acad Sci U S A VL - 95 UR - https://doi.org/10.1073/pnas.95.7.3708 DO - 10.1073/pnas.95.7.3708 ID - Zhang1998 ER - TY - JOUR AU - Shiu, S. H. AU - Byrnes, J. K. AU - Pan, R. AU - Zhang, P. AU - Li, W. H. PY - 2006 DA - 2006// TI - Role of positive selection in the retention of duplicate genes in mammalian genomes JO - Proc Natl Acad Sci U S A VL - 103 UR - https://doi.org/10.1073/pnas.0510388103 DO - 10.1073/pnas.0510388103 ID - Shiu2006 ER - TY - JOUR AU - Benderoth, M. AU - Textor, S. AU - Windsor, A. J. AU - Mitchell-Olds, T. AU - Gershenzon, J. AU - Kroymann, J. PY - 2006 DA - 2006// TI - Positive selection driving diversification in plant secondary metabolism JO - Proc Natl Acad Sci U S A VL - 103 UR - https://doi.org/10.1073/pnas.0601738103 DO - 10.1073/pnas.0601738103 ID - Benderoth2006 ER - TY - JOUR AU - Barkman, T. J. AU - Martins, T. R. AU - Sutton, E. AU - Stout, J. T. PY - 2007 DA - 2007// TI - Positive selection for single amino acid change promotes substrate discrimination of a plant volatile-producing enzyme JO - Mol Biol Evol VL - 24 UR - https://doi.org/10.1093/molbev/msm053 DO - 10.1093/molbev/msm053 ID - Barkman2007 ER - TY - STD TI - Liu PL, Wan JN, Guo YP, Ge S, Rao GY. Adaptive evolution of the chrysanthemyl diphosphate synthase gene involved in irregular monoterpene metabolism. BMC Evol Biol. 2012;12:214. ID - ref33 ER - TY - STD TI - Huang Y, Wang X, Ge S, Rao GY. Divergence and adaptive evolution of the gibberellin oxidase genes in plants. BMC Evol Biol. 2015;15:207. ID - ref34 ER - TY - JOUR AU - Zhang, X. S. AU - Choi, J. H. AU - Heinz, J. AU - Chetty, C. S. PY - 2006 DA - 2006// TI - Domain-specific positive selection contributes to the evolution of Arabidopsis Leucine-rich repeat receptor-like kinase (LRR RLK) genes JO - J Mol Evol VL - 63 UR - https://doi.org/10.1007/s00239-005-0187-z DO - 10.1007/s00239-005-0187-z ID - Zhang2006 ER - TY - JOUR AU - Wang, G. L. AU - Ruan, D. L. AU - Song, W. Y. AU - Sideris, S. AU - Chen, L. AU - Pi, L. Y. AU - Zhang, S. AU - Zhang, Z. AU - Fauquet, C. AU - Gaut, B. S. PY - 1998 DA - 1998// TI - Xa21D encodes a receptor-like molecule with a leucine-rich repeat domain that determines race-specific recognition and is subject to adaptive evolution JO - Plant Cell VL - 10 UR - https://doi.org/10.1105/tpc.10.5.765 DO - 10.1105/tpc.10.5.765 ID - Wang1998 ER - TY - JOUR AU - Tan, S. AU - Wang, D. AU - Ding, J. AU - Tian, D. AU - Zhang, X. AU - Yang, S. PY - 2011 DA - 2011// TI - Adaptive evolution of Xa21 homologs in Gramineae JO - Genetica VL - 139 UR - https://doi.org/10.1007/s10709-012-9645-x DO - 10.1007/s10709-012-9645-x ID - Tan2011 ER - TY - JOUR AU - Vetter, M. M. AU - Kronholm, I. AU - He, F. AU - Haeweker, H. AU - Reymond, M. AU - Bergelson, J. AU - Robatzek, S. AU - Meaux, J. PY - 2012 DA - 2012// TI - Flagellin perception varies quantitatively in Arabidopsis thaliana and its relatives JO - Mol Biol Evol VL - 29 UR - https://doi.org/10.1093/molbev/mss011 DO - 10.1093/molbev/mss011 ID - Vetter2012 ER - TY - STD TI - The Arabidopsis Information Resource. http://www.arabidopsis.org/. Accessed 28 Apr 2015. UR - http://www.arabidopsis.org/ ID - ref39 ER - TY - STD TI - Phytozome v11.0. https://phytozome.jgi.doe.gov/pz/portal.html##. Accessed 30 Jan 2016. UR - https://phytozome.jgi.doe.gov/pz/portal.html ID - ref40 ER - TY - JOUR AU - Hall, T. A. PY - 1999 DA - 1999// TI - BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT JO - Nucleic Acids Symp Ser VL - 41 ID - Hall1999 ER - TY - JOUR AU - Finn, R. D. AU - Coggill, P. AU - Eberhardt, R. Y. AU - Eddy, S. R. AU - Mistry, J. AU - Mitchell, A. L. AU - Potter, S. C. AU - Punta, M. AU - Qureshi, M. AU - Sangrador-Vegas, A. PY - 2016 DA - 2016// TI - The Pfam protein families database: towards a more sustainable future JO - Nucleic Acids Res VL - 44 UR - https://doi.org/10.1093/nar/gkv1344 DO - 10.1093/nar/gkv1344 ID - Finn2016 ER - TY - JOUR AU - Schultz, J. AU - Copley, R. R. AU - Doerks, T. AU - Ponting, C. P. AU - Bork, P. PY - 2000 DA - 2000// TI - SMART: a web-based tool for the study of genetically mobile domains JO - Nucleic Acids Res VL - 28 UR - https://doi.org/10.1093/nar/28.1.231 DO - 10.1093/nar/28.1.231 ID - Schultz2000 ER - TY - JOUR AU - Krogh, A. AU - Larsson, B. AU - Heijne, G. AU - Sonnhammer, E. L. PY - 2001 DA - 2001// TI - Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes JO - J Mol Biol VL - 305 UR - https://doi.org/10.1006/jmbi.2000.4315 DO - 10.1006/jmbi.2000.4315 ID - Krogh2001 ER - TY - STD TI - Dievart A, Gilbert N, Droc G, Attard A, Gourgues M, Guiderdoni E, Perin C. Leucine-Rich repeat receptor kinases are sporadically distributed in eukaryotic genomes. BMC Evol Biol. 2011;11:367. ID - ref45 ER - TY - JOUR AU - Lehti-Shiu, M. D. AU - Zou, C. AU - Hanada, K. AU - Shiu, S. -. H. PY - 2009 DA - 2009// TI - Evolutionary history and stress regulation of plant receptor-like kinase/Pelle genes JO - Plant Physiol VL - 150 UR - https://doi.org/10.1104/pp.108.134353 DO - 10.1104/pp.108.134353 ID - Lehti-Shiu2009 ER - TY - JOUR AU - Edgar, R. C. PY - 2004 DA - 2004// TI - MUSCLE: multiple sequence alignment with high accuracy and high throughput JO - Nucleic Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh340 DO - 10.1093/nar/gkh340 ID - Edgar2004 ER - TY - JOUR AU - Stamatakis, A. PY - 2006 DA - 2006// TI - RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models JO - Bioinformatics VL - 22 UR - https://doi.org/10.1093/bioinformatics/btl446 DO - 10.1093/bioinformatics/btl446 ID - Stamatakis2006 ER - TY - JOUR AU - Darriba, D. AU - Taboada, G. L. AU - Doallo, R. AU - Posada, D. PY - 2011 DA - 2011// TI - ProtTest 3: fast selection of best-fit models of protein evolution JO - Bioinformatics VL - 27 UR - https://doi.org/10.1093/bioinformatics/btr088 DO - 10.1093/bioinformatics/btr088 ID - Darriba2011 ER - TY - JOUR AU - Hu, B. AU - Jin, J. AU - Guo, A. -. Y. AU - Zhang, H. AU - Luo, J. AU - Gao, G. PY - 2015 DA - 2015// TI - GSDS 2.0: an upgraded gene feature visualization server JO - Bioinformatics VL - 31 UR - https://doi.org/10.1093/bioinformatics/btu817 DO - 10.1093/bioinformatics/btu817 ID - Hu2015 ER - TY - JOUR AU - Bailey, T. L. AU - Boden, M. AU - Buske, F. A. AU - Frith, M. AU - Grant, C. E. AU - Clementi, L. AU - Ren, J. AU - Li, W. W. AU - Noble, W. S. PY - 2009 DA - 2009// TI - MEME SUITE: tools for motif discovery and searching JO - Nucleic Acids Res VL - 37 UR - https://doi.org/10.1093/nar/gkp335 DO - 10.1093/nar/gkp335 ID - Bailey2009 ER - TY - JOUR AU - Fischer, I. AU - Dainat, J. AU - Ranwez, V. AU - Glemin, S. AU - Dufayard, J. F. AU - Chantret, N. PY - 2014 DA - 2014// TI - Impact of recurrent gene duplication on adaptation of plant genomes JO - BMC Plant Biol. VL - 14 UR - https://doi.org/10.1186/1471-2229-14-151 DO - 10.1186/1471-2229-14-151 ID - Fischer2014 ER - TY - JOUR AU - Dufayard, J. F. AU - Duret, L. AU - Penel, S. AU - Gouy, M. AU - Rechenmann, F. AU - Perriere, G. PY - 2005 DA - 2005// TI - Tree pattern matching in phylogenetic trees: automatic search for orthologs or paralogs in homologous gene sequence databases JO - Bioinformatics VL - 21 UR - https://doi.org/10.1093/bioinformatics/bti325 DO - 10.1093/bioinformatics/bti325 ID - Dufayard2005 ER - TY - JOUR AU - Yang, Z. PY - 2007 DA - 2007// TI - PAML 4: Phylogenetic analysis by maximum likelihood JO - Mol Biol Evol VL - 24 UR - https://doi.org/10.1093/molbev/msm088 DO - 10.1093/molbev/msm088 ID - Yang2007 ER - TY - JOUR AU - Xia, X. PY - 2013 DA - 2013// TI - DAMBE5: a comprehensive software package for data analysis in molecular biology and evolution JO - Mol Biol Evol VL - 30 UR - https://doi.org/10.1093/molbev/mst064 DO - 10.1093/molbev/mst064 ID - Xia2013 ER - TY - JOUR AU - Guindon, S. AU - Dufayard, J. -. F. AU - Lefort, V. AU - Anisimova, M. AU - Hordijk, W. AU - Gascuel, O. PY - 2010 DA - 2010// TI - New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0 JO - Syst Biol VL - 59 UR - https://doi.org/10.1093/sysbio/syq010 DO - 10.1093/sysbio/syq010 ID - Guindon2010 ER - TY - JOUR AU - Kobe, B. AU - Kajava, A. V. PY - 2001 DA - 2001// TI - The leucine-rich repeat as a protein recognition motif JO - Curr Opin Struct Biol VL - 11 UR - https://doi.org/10.1016/S0959-440X(01)00266-4 DO - 10.1016/S0959-440X(01)00266-4 ID - Kobe2001 ER - TY - JOUR AU - Lehti-Shiu, M. D. AU - Shiu, S. -. H. PY - 2012 DA - 2012// TI - Diversity, classification and function of the plant protein kinase superfamily JO - Phil Trans R Soc B VL - 367 UR - https://doi.org/10.1098/rstb.2012.0003 DO - 10.1098/rstb.2012.0003 ID - Lehti-Shiu2012 ER - TY - JOUR AU - Albrecht, C. AU - Russinova, E. AU - Kemmerling, B. AU - Kwaaitaal, M. AU - Vries, S. C. PY - 2008 DA - 2008// TI - Arabidopsis SOMATIC EMBRYOGENESIS RECEPTOR KINASE proteins serve brassinosteroid-dependent and -independent signaling pathways JO - Plant Physiol VL - 148 UR - https://doi.org/10.1104/pp.108.123216 DO - 10.1104/pp.108.123216 ID - Albrecht2008 ER - TY - STD TI - Eyueboglu B, Pfister K, Haberer G, Chevalier D, Fuchs A, Mayer KFX, Schneitz K. Molecular characterisation of the STRUBBELIG-RECEPTOR FAMILY of genes encoding putative leucine-rich repeat receptor-like kinases in Arabidopsis thaliana. BMC Plant Biol. 2007;7. ID - ref60 ER - TY - JOUR AU - Chang, F. AU - Gu, Y. AU - Ma, H. AU - Yang, Z. PY - 2013 DA - 2013// TI - AtPRK2 promotes ROP1 activation via RopGEFs in the control of polarized pollen tube growth JO - Mol Plant VL - 6 UR - https://doi.org/10.1093/mp/sss103 DO - 10.1093/mp/sss103 ID - Chang2013 ER - TY - JOUR AU - Fisher, K. AU - Turner, S. PY - 2007 DA - 2007// TI - PXY, a receptor-like kinase essential for maintaining polarity during plant vascular-tissue development JO - Curr Biol VL - 17 UR - https://doi.org/10.1016/j.cub.2007.05.049 DO - 10.1016/j.cub.2007.05.049 ID - Fisher2007 ER - TY - JOUR AU - Floyd, S. K. AU - Bowman, J. L. PY - 2007 DA - 2007// TI - The ancestral developmental tool kit of land plants JO - Int J Plant Sci VL - 168 UR - https://doi.org/10.1086/509079 DO - 10.1086/509079 ID - Floyd2007 ER - TY - JOUR AU - Jones, M. A. AU - Raymond, M. J. AU - Smirnoff, N. PY - 2006 DA - 2006// TI - Analysis of the root-hair morphogenesis transcriptome reveals the molecular identity of six genes with roles in root-hair development in Arabidopsis JO - Plant J VL - 45 UR - https://doi.org/10.1111/j.1365-313X.2005.02609.x DO - 10.1111/j.1365-313X.2005.02609.x ID - Jones2006 ER - TY - JOUR AU - Porcelli, D. AU - Barsanti, P. AU - Pesole, G. AU - Caggese, C. PY - 2007 DA - 2007// TI - The nuclear OXPHOS genes in insecta: a common evolutionary origin, a common cis-regulatory motif, a common destiny for gene duplicates JO - BMC Evol Biol VL - 7 UR - https://doi.org/10.1186/1471-2148-7-215 DO - 10.1186/1471-2148-7-215 ID - Porcelli2007 ER - TY - JOUR AU - Fedorov, A. AU - Merican, A. F. AU - Gilbert, W. PY - 2002 DA - 2002// TI - Large-scale comparison of intron positions among animal, plant, and fungal genes JO - Proc Natl Acad Sci U S A VL - 99 UR - https://doi.org/10.1073/pnas.242624899 DO - 10.1073/pnas.242624899 ID - Fedorov2002 ER - TY - JOUR AU - Babenko, V. N. AU - Rogozin, I. B. AU - Mekhedov, S. L. AU - Koonin, E. V. PY - 2004 DA - 2004// TI - Prevalence of intron gain over intron loss in the evolution of paralogous gene families JO - Nucleic Acids Res VL - 32 UR - https://doi.org/10.1093/nar/gkh686 DO - 10.1093/nar/gkh686 ID - Babenko2004 ER - TY - STD TI - Wu Y, Wang L, Zhou M, You Y, Zhu X, Qiang Y, Qin M, Luo S, Ren Z, Xu A. molecular evolution and diversity of Conus peptide toxins, as revealed by gene structure and intron sequence analyses. PLoS One. 2013;8(12):e82495. ID - ref68 ER - TY - JOUR AU - Volokita, M. AU - Rosilio-Brami, T. AU - Rivkin, N. AU - Zik, M. PY - 2011 DA - 2011// TI - Combining comparative sequence and genomic data to ascertain phylogenetic relationships and explore the evolution of the large GDSL-lipase family in land plants JO - Mol Biol Evol VL - 28 UR - https://doi.org/10.1093/molbev/msq226 DO - 10.1093/molbev/msq226 ID - Volokita2011 ER - TY - JOUR AU - Ogawa, M. AU - Shinohara, H. AU - Sakagami, Y. AU - Matsubayashi, Y. PY - 2008 DA - 2008// TI - Arabidopsis CLV3 peptide directly binds CLV1 ectodomain JO - Science VL - 319 UR - https://doi.org/10.1126/science.1150083 DO - 10.1126/science.1150083 ID - Ogawa2008 ER - TY - JOUR AU - Krupa, A. AU - Preethl, G. AU - Srinivasan, N. PY - 2004 DA - 2004// TI - Structural modes of stabilization of permissive phosphorylation sites in protein kinases: distinct strategies in Ser/Thr and Tyr kinases JO - J Mol Biol VL - 339 UR - https://doi.org/10.1016/j.jmb.2004.04.043 DO - 10.1016/j.jmb.2004.04.043 ID - Krupa2004 ER - TY - JOUR AU - Chevalier, D. AU - Batoux, M. AU - Fulton, L. AU - Pfister, K. AU - Yadav, R. K. AU - Schellenberg, M. AU - Schneitz, K. PY - 2005 DA - 2005// TI - STRUBBELIG defines a receptor kinase-mediated signaling pathway regulating organ development in Arabidopsis JO - Proc Natl Acad Sci U S A VL - 102 UR - https://doi.org/10.1073/pnas.0503526102 DO - 10.1073/pnas.0503526102 ID - Chevalier2005 ER - TY - JOUR AU - Yan, L. AU - Ma, Y. AU - Liu, D. AU - Wei, X. AU - Sun, Y. AU - Chen, X. AU - Zhao, H. AU - Zhou, J. AU - Wang, Z. AU - Shui, W. PY - 2012 DA - 2012// TI - Structural basis for the impact of phosphorylation on the activation of plant receptor-like kinase BAK1 JO - Cell Res VL - 22 UR - https://doi.org/10.1038/cr.2012.74 DO - 10.1038/cr.2012.74 ID - Yan2012 ER - TY - JOUR AU - Porter, K. AU - Shimono, M. AU - Tian, M. AU - Day, B. PY - 2012 DA - 2012// TI - Arabidopsis actin-depolymerizing factor-4 links pathogen perception, defense activation and transcription to cytoskeletal dynamics JO - PLoS Path VL - 8 UR - https://doi.org/10.1371/journal.ppat.1003006 DO - 10.1371/journal.ppat.1003006 ID - Porter2012 ER - TY - JOUR AU - Song, W. Y. AU - Wang, G. L. AU - Chen, L. L. AU - Kim, H. S. AU - Pi, L. Y. AU - Holsten, T. AU - Gardner, J. AU - Wang, B. AU - Zhai, W. X. AU - Zhu, L. H. PY - 1995 DA - 1995// TI - A receptor kinase-like protein encoded by the rice disease resistance gene, Xa21 JO - Science VL - 270 UR - https://doi.org/10.1126/science.270.5243.1804 DO - 10.1126/science.270.5243.1804 ID - Song1995 ER -