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Table 3 Association of G6PC2 variants with T2D

From: Susceptibility to type 2 diabetes may be modulated by haplotypes in G6PC2, a target of positive selection

Sample/SNP (Variant)

Genotype frequency

Minor/Major allele

Minor allele freq (%)

Corrected p value

OR (IC 95%)

Corrected p value

OR (IC 95%)

      

Unconditional

Conditional on rs560887

rs560887, intronic, (GWAS)

 

CC

CT

TT

      

 Diabetic cohort

0.643

0.319

0.038

T/C

19.7

0.368

1.23 (0.78–1.95)

-

-

 Control cohort

0.679

0.276

0.045

 

18.3

    

rs492594 (p.Val219Leu)

 

GG

GC

CC

      

 Diabetic cohort

0.334

0.475

0.19

C/G

42.9

0.099

1.50 (1.03–2.18)

0.018

1.70 (1.14–2.54)

 Control cohort

0.368

0.483

0.149

 

39.1

    

rs2232328 (p.Ser342Cys)

 

CC

CG

GG

      

 Diabetic cohort

0.619

0.299

0.081

G/C

23.1

0.099

1.51 (0.97–2.36)

0.034

1.64 (1.04–2.58)

 Control cohort

0.688

0.274

0.038

 

17.5

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