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Table 3 Precision (prec) and sensitivity (sens) as a function of the proportion of differentially selected sites (f) in condition 2, under model M1 and M2

From: Detecting consistent patterns of directional adaptation using differential selection codon models

Threshold M1 M2
f = 0.5 f = 0.1 f = 0.05 f = 0.5 f = 0.1 f = 0.05
Prec Sens Prec Sens Prec Sens Prec Sens Prec Sens Prec Sens
>0.50 26.7 53.5 4.7 47.0 2.8 56.4 2.5 49.7 5.3 53.0 25.5 51.1
>0.55 39.1 9.0 7.7 7.6 4.7 9.3 4.0 8.4 8.3 8.4 37.5 8.5
>0.60 47.0 6.1 10.0 4.9 6.3 6.0 5.6 5.4 10.9 5.3 45.2 5.2
>0.65 55.2 4.3 14.1 3.5 9.0 4.4 8.2 3.8 14.3 3.4 52.8 3.4
>0.70 67.0 2.9 21.9 2.4 15.8 3.2 12.1 2.1 21.3 1.8 63.8 1.9
>0.75 78.7 2.0 34.4 1.8 25.7 2.5 23.3 1.4 33.0 1.1 78.2 1.1
>0.80 84.1 1.5 50.8 1.4 35.2 1.8 33.0 0.7 44.8 0.6 86.5 0.7
>0.85 91.2 1.1 66.2 1.0 49.0 1.2 41.4 0.3 73.7 0.3 92.7 0.3
>0.90 93.5 0.8 81.7 0.7 68.3 0.6 33.3 0.1 90.9 0.1 100 0.1
>0.95 96.0 0.4 93.3 0.3 86.7 0.3 0.0 0.0 100 0.01 100 0.03