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Table 4 Precision (prec) and sensitivity (sens) as a function of the proportion of differentially selected sites (f) in condition 3, under model M1 and M2

From: Detecting consistent patterns of directional adaptation using differential selection codon models

Threshold M1 M2
f = 0.5 f = 0.1 f = 0.05 f = 0.5 f = 0.1 f = 0.05
Prec Sens Prec Sens Prec Sens Prec Sens Prec Sens Prec Sens
>0.50 26.6 53.2 5.2 51.6 2.5 49.8 2.7 54.3 5.1 51.0 26.1 52.2
>0.55 40.2 12.0 8.3 10.7 4.0 10.2 4.4 11.7 8.3 10.8 37.2 10.9
>0.60 47.2 8.3 10.7 7.6 5.5 7.4 5.7 7.9 10.5 7.6 44.1 7.4
>0.65 54.1 6.2 13.6 5.5 7.5 5.6 6.7 5.1 13.5 5.4 49.5 5.0
>0.70 64.7 3.9 21.4 3.7 11.9 3.6 9.9 2.9 21.4 3.3 60.2 2.9
>0.75 75.6 3.0 32.1 2.9 18.1 2.6 14.3 1.8 34.4 2.5 70.7 1.9
>0.80 83.5 2.4 44.4 2.3 27.5 2.1 22.7 1.2 50.3 1.8 80.8 1.2
>0.85 90.7 1.8 61.6 1.8 46.4 1.8 38.2 0.8 67.1 1.1 88.7 0.7
>0.90 93.7 1.4 77.3 1.3 64.1 1.3 66.7 0.4 79.4 0.6 97.1 0.4
>0.95 96.8 1.0 89.2 0.8 89.1 0.9 100 0.1 100 0.2 98.3 0.1