Skip to main content

Table 1 Classical cadherin genes found in publicly available genome sequences of non-hexapod arthropods

From: Evolutionary origin of type IV classical cadherins in arthropods

Taxon/species

Genome accession

#Scaffold (Gene accession)

Type

Product

Chelicerata, Araneae

  Parasteatoda tepidariorum

GCA_000365465.1

#55/#753 (AB190303)

III

Pt1-cadherin

#493 (LC110189)

III

Pt2-cadherin

  Stegodyphus mimosarum

GCA_000611955.2

#7/#4105/#15,197/#13303a

III

(Close to Pt1)

#10064/#11,847/#1110a

III

(Close to Pt2)

Chelicerata, Scorpiones

  Mesobuthus martensii

GCA_000484575.1

#343080b, c, d

III

Mma1-cadherin

#352483b, c, d

III

Mma2-cadherin

Chelicerata, Acari

  Tetranychus urticae

GCA_000239435.1

#8 (XP_015784984)

III

 

  Metaseiulus occidentalis

GCA_000255335.1

#JH621154 (XM_003743492)

III

Mo-cadherin

Myriapoda, Chilopod

  Strigamia maritima

GCA_000239455.1

#JH431948/#JH431738d

III

Sm2-cadherin

#JH430824d (SMAR001807)

n.c.

Sm1-cadherin

Crustacea, Branchiopoda

  Daphnia pulex

GCA_000187875.1

#100 (EFX70325)

III

Dp2-cadherin

#3 (EFX89066)

IVa

Dp1-cadherin

Crustacea, Copepoda

  Eurytemora affinis

GCA_000591075.1

#33d

III

Ea2-cadherin

#103273/#511d

IVa

Ea1-cadherin

Crustacea, Isopoda

  Ligia exotica

BDMT010000000

(AB190302)

III

Le2-cadherin

(LC110190)

IVb

Le1-cadherin

Crustacea, Amphipoda

  Hyalella azteca

GCA_000764305.2

#323 (XM_018161032)

III

Ha2-cadherin

#236 (XM_018157906)

IVb

Ha1-cadherin

  Parhyale hawaiensis

GCA_001587735.1

#25754c, e (tra_m.010273)

III

Ph2-cadherin

#4723 (tra_m.024063)

IVb

Ph1-cadherin

Crustacea, Decapoda

  Caridina multidentata

BDMR010000000

(AB190301)

III

Cm-cadherin

  1. aThe scaffolds were linked by detected sequences that were very similar to those of Pt1- or Pt2-cadherin
  2. b#Contig
  3. cOnly the scaffold or contig containing exons coding for the CP domain is shown
  4. dSequence details are available in Additional files 11 and 12
  5. e#95284 was detected as a partial duplicate. n.c., not categorized