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Fig. 3 | BMC Evolutionary Biology

Fig. 3

From: Retention of functional variation despite extreme genomic erosion: MHC allelic repertoires in the Lynx genus

Fig. 3

Lynx MHC class I and class II DRB supertypes. We used average hierarchical clustering and a cut-off threshold of Euclidean distance ≥15 to classify alleles into distinctive functional groups (supertypes, ST) based on functional similarity of their ABS. Alleles with identical amino acids at ABS are represented as polytomies at 0 Euclidean distance. Alleles in the same line are identical at the nucleotide level. Alleles are specified with their allele number in each species

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