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Table 5 Genic loci flagged as FST outliers in the marine environment

From: Contemporary ancestor? Adaptive divergence from standing genetic variation in Pacific marine threespine stickleback

Ensembl Gene ID (ENSGACG000000)

LG

Gene name

N SNPS

XtX

15469

II

novel

1

20.36

15747

II

nfat5b

1

16.44

15682

III

glmna

2

16.15

18231

IV

abcb7

2

17.88

19242

IV

cog5

1

16.92

19472

IV

nav3

1

25.43

20913

VII

csf1rb

1

16.54

03347

VIII

podn

1

19.78

07733

VIII

csnk1g2a

1

17.90

17193

IX

nr3c2

1

17.73

05403

XI

dus1l

2

16.96

03535

XII

OVGP1

1

17.27

08321

XIX

tnni2a.2

1

19.16

08898

XIX

CERK (1 of many)

1

15.55

02461

XXI

CNTNAP2 (1 of many)

1

20.75

02744

XXI

jph1a

2

23.48

  1. LG Linkage Group. XtX provides an average if the number of SNPs is > 1. The XtX threshold, above which a SNP was considered an outlier, was 15.52