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Fig. 4 | BMC Evolutionary Biology

Fig. 4

From: Duplication and expression of Sox genes in spiders

Fig. 4

Sox gene synteny in the P. tepidariorum genome. The synteny of Sox genes (red) and flanking genes that have putative homology (black) compared between the Sox paralogs. Homology of flanking genes was also used to indicate tandem duplicates (pink), transposable elements (TEs) (blue). Genes that lack homology are shown in grey with their gene model IDs. Only the SoxF genes were found in the same transcriptional orientation as upstream TEs. Of the thirteen Sox containing scaffolds, six scaffolds contained TEs that flank the Sox genes. Transcriptional direction is indicated by arrows. The DoveTail/HiRise scaffold ID numbers are given on the right

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