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Table 1 Selective patterns for PG genes

From: Duplication and expression of horizontally transferred polygalacturonase genes is associated with host range expansion of mirid bugs

Model

npa

Ln Lb

Estimates of ω

Models compared

LRTc

P Values

Branch model

A: one ratio

293

−59,339.55

ω = 0.10894

   

B: one ratio ω = 1

292

−64,212.66

ω = 1

B vs. A

9746.22

0.0

C: predacity branches have ω1, the other branches have ω0

294

−59,339.50

ω1 = 0.09379

ω0 = 0.10900

A vs. C

0.1

0.75

D: predacity branches have ω1 = 1

293

−59,360.06

ω1 = 1

ω0 = 0.10798

D vs. C

41.12

0.0

  1. aNumber of parameters
  2. bThe natural logarithm of the likelihood value
  3. cTwice the log likelihood difference between the two models