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Table 1 Basic information of plastid genomes used in this study

From: Evolution of plastid genomes of Holcoglossum (Orchidaceae) with recent radiation

Species

Mean coverage

Length (bp)

GC Content (%)

No. vouchers specimen or NCBI accession

Total

LSC

SSC

IR

Holcoglossum nujiangense_S1_S16

220

146,487

82,955

11,916

25,808

35.4

Jin Xiaohua 6930

Holcoglossum nujiangense_S5_S9

539

146,395

82,873

11,906

25,808

35.4

Jin Xiaohua 10,897

Holcoglossum weixiense

205

146,597

82,981

12,000

25,808

35.4

HK Kadoorie Program Team 3490

Holcoglossum sinicum

507

145,909

82,658

11,635

25,808

35.4

Jin Xiaohua 14,683

Holcoglossum flavescens _S2_S18

183

146,863

83,288

11,959

25,808

35.3

Jin Xiaohua 8943

Holcoglossum flavescens_S5_S10

489

146,763

83,188

11,959

25,808

35.4

Jin Xiaohua 15,165

Holcoglossum rupestre

75

147,163

83,575

11,936

25,826

35.3

Jin Xiaohua 9015

Holcoglossum quasipinifolium

131

147,063

83,440

12,079

25,772

35.4

JXH028

Holcoglossum lingulatum

151

146,525

83,713

11,274

25,769

35.5

Jin Xiaohua 9491

Holcoglossum nagalandensis

357

146,826

83,763

11,477

25,793

35.3

Jin Xiaohua 10,522

Holcoglossum amesianum

425

148,074

84,250

12,026

25,899

35.3

Jin Xiaohua 9419

Holcoglossum himalaicum

752

145,207

83,712

11,413

25,041

35.3

Jin Xiaohua 9496

Holcoglossum wangii

209

147,170

83,846

11,594

25,866

35.4

Jin Xiaohua 13,881

Holcoglossum subulifolium

360

146,930

83,398

11,802

25,865

35.5

Jin Xiaohua 13,614

Neofinetia falcata

_

146,497

83,809

11,775

25,456

35.3

NC_036372

Neofinetia richardsiana

_

146,498

83,809

11,775

25,457

35.3

NC_036373

Vanda brunnea

191

149,216

85,783

11,713

25,860

35.3

Jin Xiaohua 13,059